RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 IGF2P01344 180 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 CISD3P0C7P0 127 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 LAG3P18627 525 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 MST1P26927 711 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 MNX1P50219 401 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-205ENST00000539661 MC2RQ01718 297 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 OC90Q02509 493 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-205ENST00000539661 MLF2Q15773 248 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-205ENST00000539661 PCGF3Q3KNV8 242 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 FAM74A3Q4VXF1 159 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 EXOSC6Q5RKV6 272 aaKnown RBP16.14■□□□□ 0.17
RAB40C-205ENST00000539661 MOB3CQ70IA8 216 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 PAQR7Q86WK9 346 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 CCDC36Q8IYA8 594 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 SDR9C7Q8NEX9 313 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 OR4C16Q8NGL9 310 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 TNFAIP8L1Q8WVP5 186 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 INSM2Q96T92 566 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-205ENST00000539661 ZNF426Q9BUY5 554 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 XKR8Q9H6D3 395 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 IFT22Q9H7X7 185 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 TCF7L1Q9HCS4 588 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 C2orf42Q9NWW7 574 aa16.14■□□□□ 0.17
RAB40C-205ENST00000539661 A0A0B4J2E0 115 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 A0A1B0GX12 115 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 EIF4E2O60573 245 aaKnown RBP16.13■□□□□ 0.17
RAB40C-205ENST00000539661 RLN1P04808 185 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 PTHLHP12272 177 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 HIST1H1CP16403 213 aaKnown RBP16.13■□□□□ 0.17
RAB40C-205ENST00000539661 RPS15P62841 145 aaKnown RBP16.13■□□□□ 0.17
RAB40C-205ENST00000539661 S100A12P80511 92 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 CDK3Q00526 305 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 DCAF12L2Q5VW00 463 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 LILRA6Q6PI73 481 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 STAC2Q6ZMT1 411 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 BARX1Q9HBU1 254 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-205ENST00000539661 USP36Q9P275 1121 aaKnown RBP16.13■□□□□ 0.17
RAB40C-205ENST00000539661 PRICKLE3O43900 615 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-205ENST00000539661 CSF2RAP15509 400 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 BTN3A2P78410 334 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 IRF4Q15306 451 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 STPG1Q5TH74 334 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 SLC6A19Q695T7 634 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 UQCC3Q6UW78 93 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 OR4K14Q8NGD5 310 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 OR4K13Q8NH42 304 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 COL26A1Q96A83 441 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 DUSP22Q9NRW4 184 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 TAS2R3Q9NYW6 316 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 KCNE5Q9UJ90 142 aa16.13■□□□□ 0.17
RAB40C-205ENST00000539661 H7C2Y5 167 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 NDUFB2O95178 105 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 CCL5P13501 91 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 SORDQ00796 357 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 TNFRSF17Q02223 184 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 GRM7Q14831 915 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 CCDC157Q569K6 752 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 OR2L3Q8NG85 312 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 RGP1Q92546 391 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-205ENST00000539661 GAL3ST3Q96A11 431 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 MYADMQ96S97 322 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 MRTO4Q9UKD2 239 aaKnown RBP16.12■□□□□ 0.17
RAB40C-205ENST00000539661 WNT6Q9Y6F9 365 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 ZFPL1O95159 310 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 FGF19O95750 216 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 AK1P00568 194 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 MELTFP08582 738 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 EPCAMP16422 314 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 ITPKBP27987 946 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 COL9A2Q14055 689 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-205ENST00000539661 MELKQ14680 651 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 TEAD2Q15562 447 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 Q499Y3 187 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 C11orf88Q6PI97 169 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 EDAQ92838 391 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 PHYHIPLQ96FC7 376 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 RBM18Q96H35 190 aaKnown RBP16.12■□□□□ 0.17
RAB40C-205ENST00000539661 PBX4Q9BYU1 374 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 APMAPQ9HDC9 416 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 TMEM138Q9NPI0 162 aa16.12■□□□□ 0.17
RAB40C-205ENST00000539661 C19orf53Q9UNZ5 99 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-205ENST00000539661 EDDM13A0A1B0GTR0 161 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 GPR89AB7ZAQ6 455 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 PEX12O00623 359 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 GPR89BP0CG08 455 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 AKAIN1P0CW23 69 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 SLC39A5Q6ZMH5 540 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 RELL2Q8NC24 303 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-205ENST00000539661 BPIFCQ8NFQ6 507 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 STACQ99469 402 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 C1orf198Q9H425 327 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 CCDC86Q9H6F5 360 aaKnown RBP16.11■□□□□ 0.17
RAB40C-205ENST00000539661 PRDM9Q9NQV7 894 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 DENND4AQ7Z401 1863 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 TMEM272A0A1B0GTI8 110 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 CCL16O15467 120 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 CNR1P21554 472 aa16.11■□□□□ 0.17
RAB40C-205ENST00000539661 NANOS3P60323 173 aaKnown RBP16.11■□□□□ 0.17
RAB40C-205ENST00000539661 SSBP1Q04837 148 aaKnown RBP16.11■□□□□ 0.17
RAB40C-205ENST00000539661 LTBQ06643 244 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms