RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DMBX1Q8NFW5 382 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 OR4N2Q8NGD1 307 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 FAM3CQ92520 227 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 EXTL1Q92935 676 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 MARC2Q969Z3 335 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 UBXN10Q96LJ8 280 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF75AQ96N20 296 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 ADOQ96SZ5 270 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 SLC23A2Q9UGH3 650 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 COL1A1P02452 1464 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 H0Y8G0 127 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 C21orf33P30042 268 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 KIAA1024LP59773 190 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 GUK1Q16774 197 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 ADAM5Q6NVV9 412 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 GAREM2Q75VX8 874 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 HSD11B1LQ7Z5J1 315 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 LRRC56Q8IYG6 542 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 OR6V1Q8N148 313 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 DUSP19Q8WTR2 217 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 KCTD12Q96CX2 325 aaKnown RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 UBQLN4Q9NRR5 601 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 RALYQ9UKM9 306 aaKnown RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 LRRC37A3O60309 1634 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 BCKDHBP21953 392 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 HOXA1P49639 335 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF140P52738 457 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 CPNE4Q96A23 557 aaPredicted RBP9.26□□□□□ -0.93
COL4A6-208ENST00000538570 VN1R3Q9BXE9 311 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 SLC6A17Q9H1V8 727 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 PRO1933Q9H354 126 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 LIN7BQ9HAP6 207 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 KIR2DS5A0A0G2JLQ3 304 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 A0A0G2JNG1 304 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 KIR2DS3K7RE56 304 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 M0QZQ0 153 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 GPRIN2O60269 458 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 KIR2DS5Q14953 304 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 LTB4RQ15722 352 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 LAX1Q8IWV1 398 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 CLEC1AQ8NC01 280 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 OR56B1Q8NGI3 324 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 SCARB1Q8WTV0 552 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 ULBP2Q9BZM5 246 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 GALNT9Q9HCQ5 603 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 SEMA4GQ9NTN9 838 aa9.26□□□□□ -0.93
COL4A6-208ENST00000538570 J3KTA2 159 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 SLC43A1O75387 559 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 TNFRSF17Q02223 184 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 DEFB133Q30KQ1 61 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 OR14J1Q9UGF5 321 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 TMEM212A6NML5 194 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 SOCS6O14544 535 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 ADAM23O75077 832 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 OPRD1P41143 372 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 FAM209BQ5JX69 171 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 ATPAF1Q5TC12 328 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 RETREG3Q86VR2 466 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 RNF141Q8WVD5 230 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 RPL3LQ92901 407 aaKnown RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 ISG20Q96AZ6 181 aaKnown RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 DTD2Q96FN9 168 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 RBFOX1Q9NWB1 397 aaKnown RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 LRIT2A6NDA9 550 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 ZIC2O95409 532 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 CPT2P23786 658 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 POU3F1Q03052 451 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF92Q03936 586 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF91Q05481 1191 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 CEBPEQ15744 281 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF684Q5T5D7 378 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 MAMDC4Q6UXC1 1216 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 BADQ92934 168 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 MACROD1Q9BQ69 325 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 OCEL1Q9H607 264 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 SPHK1Q9NYA1 384 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 TAS2R16Q9NYV7 291 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 MYOTQ9UBF9 498 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 SLC9B1P1A6NJY1 282 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 CPMP14384 443 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 DRD1P21728 446 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 NME2P22392 152 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 S100A11P31949 105 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 GIPRP48546 466 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 SUMO1P63165 101 aaKnown RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 TSPAN31Q12999 210 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 SLX4IPQ5VYV7 408 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 SHISA6Q6ZSJ9 500 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 RNF113BQ8IZP6 322 aaKnown RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 TECTBQ96PL2 329 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 CTRCQ99895 268 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 SGPP1Q9BX95 441 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 MED17Q9NVC6 651 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 OSGIN1Q9UJX0 560 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF587BE7ETH6 402 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 C1orf105O95561 183 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 CTSAP10619 480 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms