RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PTGER4P35408 488 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 IFNGR2P38484 337 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 GSSP48637 474 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 ARHGDIAP52565 204 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 PER3P56645 1201 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 SIRPAP78324 504 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 H3F3AP84243 136 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 RPL18Q07020 188 aaKnown RBP12.23□□□□□ -0.45
CD44-224ENST00000526669 PMPCAQ10713 525 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 GK3PQ14409 553 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 SF3B4Q15427 424 aaKnown RBP eCLIP12.23□□□□□ -0.45
CD44-224ENST00000526669 MS4A18Q3C1V0 323 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 TMEM225Q6GV28 225 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 TMPRSS11FQ6ZWK6 438 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.23□□□□□ -0.45
CD44-224ENST00000526669 OAFQ86UD1 273 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 IGFN1Q86VF2 1251 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 HIPK1Q86Z02 1210 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 SVOPLQ8N434 492 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 LINC00471Q8N535 108 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 ATG16L2Q8NAA4 619 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 RNF128Q8TEB7 428 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 WNT2BQ93097 391 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 INTS12Q96CB8 462 aaKnown RBP12.23□□□□□ -0.45
CD44-224ENST00000526669 TNFRSF13CQ96RJ3 184 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 CIB1Q99828 191 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 TTYH2Q9BSA4 534 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 IL20RAQ9UHF4 553 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 MGAT4BQ9UQ53 548 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 CORINQ9Y5Q5 1042 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 PRR14LQ5THK1 2151 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 MBD3L4A6NDZ8 208 aaPredicted RBP12.22□□□□□ -0.45
CD44-224ENST00000526669 MBD3L3A6NE82 208 aaPredicted RBP12.22□□□□□ -0.45
CD44-224ENST00000526669 MBD3L5A6NJ08 208 aaPredicted RBP12.22□□□□□ -0.45
CD44-224ENST00000526669 RNF13O43567 381 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 TOXO94900 526 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 SOX14O95416 240 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 F13BP05160 661 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 IGFBP1P08833 259 aaPredicted RBP12.22□□□□□ -0.45
CD44-224ENST00000526669 HOXD4P09016 255 aaPredicted RBP12.22□□□□□ -0.45
CD44-224ENST00000526669 FCGR2AP12318 317 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 FPR3P25089 353 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 SLC9A3P48764 834 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 DAPP51397 102 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 PUDPQ08623 228 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 TSPAN31Q12999 210 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 FHL1Q13642 323 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 ZBED5Q49AG3 693 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 EEF1A1P5Q5VTE0 462 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 LPCAT4Q643R3 524 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 KIF18BQ86Y91 864 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 ZDHHC13Q8IUH4 622 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 TUSC5Q8IXB3 177 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 SCAIQ8N9R8 606 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 NAXEQ8NCW5 288 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 MBD3L2Q8NHZ7 208 aaPredicted RBP12.22□□□□□ -0.45
CD44-224ENST00000526669 FANK1Q8TC84 345 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 SDCCAG3Q96C92 435 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 NRBF2Q96F24 287 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 DMRTA2Q96SC8 542 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 PSD2Q9BQI7 771 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 DGCR6LQ9BY27 220 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 EGLN3Q9H6Z9 239 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 DCLRE1BQ9H816 532 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 MCCC2Q9HCC0 563 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 TAS2R5Q9NYW4 299 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 RASD1Q9Y272 281 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 MEMO1Q9Y316 297 aa12.22□□□□□ -0.45
CD44-224ENST00000526669 RELNP78509 3460 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 ARRDC5A6NEK1 342 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 ZNF716A6NP11 495 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 E9PLN8 166 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 SOCS2O14508 198 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 LRRTM2O43300 516 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 MITFO75030 526 aaPredicted RBP12.21□□□□□ -0.45
CD44-224ENST00000526669 ADAP00813 363 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 IL2RAP01589 272 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 TMIGD3P0DMS9 266 aaPredicted RBP12.21□□□□□ -0.45
CD44-224ENST00000526669 ANXA8P13928 327 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 ZNF26P17031 533 aaPredicted RBP12.21□□□□□ -0.45
CD44-224ENST00000526669 UQCRC1P31930 480 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 FXYD6P3P58550 94 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 POU3F1Q03052 451 aaPredicted RBP12.21□□□□□ -0.45
CD44-224ENST00000526669 FOXF2Q12947 444 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 TOP3AQ13472 1001 aaPredicted RBP12.21□□□□□ -0.45
CD44-224ENST00000526669 MELKQ14680 651 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 TRIP10Q15642 601 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 LRRC36Q1X8D7 754 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 KLHL17Q6TDP4 642 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 GALNT5Q7Z7M9 940 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 UEVLDQ8IX04 471 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 SLC43A2Q8N370 569 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 CNEP1R1Q8N9A8 125 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 ADPRHL1Q8NDY3 354 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 OR9K2Q8NGE7 335 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 LIPHQ8WWY8 451 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 SAMD8Q96LT4 415 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 OXGR1Q96P68 337 aa12.21□□□□□ -0.45
CD44-224ENST00000526669 TM9SF2Q99805 663 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms