RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FABP3P05413 133 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 H1F0P07305 194 aaKnown RBP13.29□□□□□ -0.28
RNF4-210ENST00000508235 UMPSP11172 480 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 PSMB1P20618 241 aaKnown RBP13.29□□□□□ -0.28
RNF4-210ENST00000508235 PTNP21246 168 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 PUDPQ08623 228 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 FBXW9Q5XUX1 488 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 CASP12Q6UXS9 341 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 CYP2R1Q6VVX0 501 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 ABHD12BQ7Z5M8 362 aaPredicted RBP13.29□□□□□ -0.28
RNF4-210ENST00000508235 CDK20Q8IZL9 346 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 RNF113BQ8IZP6 322 aaKnown RBP13.29□□□□□ -0.28
RNF4-210ENST00000508235 GABRG1Q8N1C3 465 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 UBE2J2Q8N2K1 259 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 FAM86B1Q8N7N1 296 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 ACOT11Q8WXI4 607 aaPredicted RBP13.29□□□□□ -0.28
RNF4-210ENST00000508235 CCDC124Q96CT7 223 aaKnown RBP13.29□□□□□ -0.28
RNF4-210ENST00000508235 SGTBQ96EQ0 304 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 C14orf79Q96F83 325 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 C7orf34Q96L11 122 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 DACH2Q96NX9 599 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 PIP5K1AQ99755 562 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 NMNAT1Q9HAN9 279 aaPredicted RBP13.29□□□□□ -0.28
RNF4-210ENST00000508235 IL1RAPQ9NPH3 570 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 MEPEQ9NQ76 525 aaPredicted RBP13.29□□□□□ -0.28
RNF4-210ENST00000508235 RHCGQ9UBD6 479 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 RCE1Q9Y256 329 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 NOX1Q9Y5S8 564 aa13.29□□□□□ -0.28
RNF4-210ENST00000508235 A0A1W2PRQ8 180 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 SH3D21A4FU49 640 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 ENO4A6NNW6 628 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 hCG_2039718K7EN88 272 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 PLPP3O14495 311 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 FFAR1O14842 300 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 PRSS23O95084 383 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 GOSR1O95249 250 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 SEMG1P04279 462 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 EPXP11678 715 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 HOXB6P17509 224 aaKnown RBP13.28□□□□□ -0.28
RNF4-210ENST00000508235 AHCYP23526 432 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 SSTR2P30874 369 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 UGT2B15P54855 530 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 VLDLRP98155 873 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 LTBQ06643 244 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 FOXD4Q12950 439 aaPredicted RBP13.28□□□□□ -0.28
RNF4-210ENST00000508235 ITGADQ13349 1161 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 DGCR6Q14129 220 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 STAC2Q6ZMT1 411 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 ZNF730Q6ZMV8 503 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 NANOGNBQ7Z5D8 188 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 PXKQ7Z7A4 578 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 UEVLDQ8IX04 471 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 ZIC4Q8N9L1 334 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 POMGNT2Q8NAT1 580 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 PIK3C3Q8NEB9 887 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 STEAP2Q8NFT2 490 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 LIPHQ8WWY8 451 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 ZNF385AQ96PM9 386 aaKnown RBP13.28□□□□□ -0.28
RNF4-210ENST00000508235 ZNF347Q96SE7 839 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 MAGIXQ9H6Y5 334 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 KRCC1Q9NPI7 259 aaPredicted RBP13.28□□□□□ -0.28
RNF4-210ENST00000508235 MAN2C1Q9NTJ4 1040 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 ASB6Q9NWX5 421 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 B3GAT1Q9P2W7 334 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 UPB1Q9UBR1 384 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 SEC14L4Q9UDX3 406 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 PRSS50Q9UI38 385 aa13.28□□□□□ -0.28
RNF4-210ENST00000508235 FREM1Q5H8C1 2179 aa13.27□□□□□ -0.28
RNF4-210ENST00000508235 MS4A18H0YCH9 400 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 CASKO14936 926 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 KRT33AO76009 404 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 OR7A10O76100 309 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 ADAP00813 363 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 ASAH2BP0C7U1 165 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 ADORA3P0DMS8 318 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 FUT1P19526 365 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 ATP6V1B2P21281 511 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 IL32P24001 234 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 MS4A2Q01362 244 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 ZP4Q12836 540 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 SNTB1Q13884 538 aaKnown RBP13.27□□□□□ -0.29
RNF4-210ENST00000508235 MS4A18Q3C1V0 323 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 FAM98BQ52LJ0 330 aaKnown RBP13.27□□□□□ -0.29
RNF4-210ENST00000508235 SFRP5Q5T4F7 317 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 LSRQ86X29 649 aaPredicted RBP13.27□□□□□ -0.29
RNF4-210ENST00000508235 CXorf67Q86X51 503 aaPredicted RBP13.27□□□□□ -0.29
RNF4-210ENST00000508235 EPHX4Q8IUS5 362 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 ZDHHC21Q8IVQ6 265 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 KDM8Q8N371 416 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 PFN4Q8NHR9 129 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 KISS1RQ969F8 398 aaPredicted RBP13.27□□□□□ -0.29
RNF4-210ENST00000508235 BPIFA2Q96DR5 249 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 CLPTM1LQ96KA5 538 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 MED18Q9BUE0 208 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 SLCO5A1Q9H2Y9 848 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 MMADHCQ9H3L0 296 aaPredicted RBP13.27□□□□□ -0.29
RNF4-210ENST00000508235 C20orf141Q9NUB4 165 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 ZNF226Q9NYT6 803 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 CRIM1Q9NZV1 1036 aa13.27□□□□□ -0.29
RNF4-210ENST00000508235 MALT1Q9UDY8 824 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms