RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PGAP1Q75T13 922 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 GDPD3Q7L5L3 318 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 APOBEC3FQ8IUX4 373 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 NAXDQ8IW45 347 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 C11orf53Q8IXP5 236 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 MICU2Q8IYU8 434 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 GABRG1Q8N1C3 465 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 TPRX1Q8N7U7 411 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 OR52H1Q8NGJ2 320 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 OR13F1Q8NGS4 319 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 GPX8Q8TED1 209 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 RAPGEF5Q92565 580 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 SGK3Q96BR1 496 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PRRC1Q96M27 445 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PANX2Q96RD6 677 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 RNF2Q99496 336 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 ANKRD60Q9BZ19 345 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 ELOVL4Q9GZR5 314 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 IL22Q9GZX6 179 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 STMN4Q9H169 189 aaPredicted RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PPA2Q9H2U2 334 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 RBKSQ9H477 322 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 C20orf96Q9NUD7 363 aaPredicted RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 GPATCH2LQ9NWQ4 482 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 MRPL22Q9NWU5 206 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 LYARQ9NX58 379 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PRODH2Q9UF12 536 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PITPNC1Q9UKF7 332 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 NUP50Q9UKX7 468 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 TRAF3IP3Q9Y228 551 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PDE10AQ9Y233 779 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 USP47Q96K76 1375 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 TNIKQ9UKE5 1360 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 SH3TC1Q8TE82 1336 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 A0A0J9YYE9 177 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 A0A1B0GUS0 222 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 VSTM2BA6NLU5 285 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 CCT8L1PA6NM43 557 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 GABRR3A8MPY1 467 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 LOC110117498-PIK3R3F6TDL0 507 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 GFYI3L273 518 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 NDUFS8O00217 210 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 FCN1O00602 326 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 DLGAP1O14490 977 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 CDX4O14627 284 aaPredicted RBP1.76□□□□□ -2.13
LMNB1-207ENST00000494185 HDAC3O15379 428 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 CLOCKO15516 846 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 AKR7A2O43488 359 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 LATO43561 262 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 HCRTR1O43613 425 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 OR2J3O76001 311 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 OR7A10O76100 309 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 C1orf105O95561 183 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 LGI1O95970 557 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 TRBC1P01850 177 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 P04436 131 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 CRYGCP07315 174 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 IVLP07476 585 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 LAMP1P11279 417 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 ZNF24P17028 368 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 STOMP27105 288 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 CD1BP29016 333 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 ADORA2BP29275 332 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 FOXN2P32314 431 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 HSD17B2P37059 387 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 RPS5P46782 204 aaKnown RBP1.76□□□□□ -2.13
LMNB1-207ENST00000494185 RPL29P47914 159 aaKnown RBP1.76□□□□□ -2.13
LMNB1-207ENST00000494185 MEOX2P50222 304 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 PKNOX1P55347 436 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 CLDN18P56856 261 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 CARD18P57730 90 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 DAOAP59103 153 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 YWHAGP61981 247 aaKnown RBP eCLIP1.76□□□□□ -2.13
LMNB1-207ENST00000494185 TLE4Q04727 773 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 SLC10A7Q0GE19 358 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 OR5I1Q13606 314 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 ARL6IP1Q15041 203 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 WDR43Q15061 677 aaKnown RBP eCLIP1.76□□□□□ -2.13
LMNB1-207ENST00000494185 OXA1LQ15070 435 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 TGFBIQ15582 683 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 HSDL1Q3SXM5 330 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 BEX5Q5H9J7 111 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 GPRC6AQ5T6X5 926 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 AGBL2Q5U5Z8 902 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 C9orf135Q5VTT2 229 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 PLCXD3Q63HM9 321 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 OR5M10Q6IEU7 315 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 OR52E8Q6IFG1 317 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 SASS6Q6UVJ0 657 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 PAMR1Q6UXH9 720 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 Q6ZSR3 168 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 C17orf82Q86X59 251 aaPredicted RBP1.76□□□□□ -2.13
LMNB1-207ENST00000494185 VRK2Q86Y07 508 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 SKA3Q8IX90 412 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 CCDC65Q8IXS2 484 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 MCOLN2Q8IZK6 566 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 B3GNT7Q8NFL0 401 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 OR4K14Q8NGD5 310 aa1.76□□□□□ -2.13
LMNB1-207ENST00000494185 OR56B4Q8NH76 319 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms