RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 TMEM239Q8WW34 195 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 FAM162AQ96A26 154 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 MCUR1Q96AQ8 359 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF845Q96IR2 970 aaPredicted RBP4.52□□□□□ -1.69
HDAC6-223ENST00000480525 PIP5K1AQ99755 562 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 FNDC11Q9BVV2 318 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 SRXN1Q9BYN0 137 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 PRRG4Q9BZD6 226 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 TRIM8Q9BZR9 551 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 NMNAT1Q9HAN9 279 aaPredicted RBP4.52□□□□□ -1.69
HDAC6-223ENST00000480525 MEPEQ9NQ76 525 aaPredicted RBP4.52□□□□□ -1.69
HDAC6-223ENST00000480525 NANSQ9NR45 359 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 ARMC1Q9NVT9 282 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 TAS2R16Q9NYV7 291 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 B3GAT1Q9P2W7 334 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 PLEKHB1Q9UF11 243 aaPredicted RBP4.52□□□□□ -1.69
HDAC6-223ENST00000480525 FBXL3Q9UKT7 428 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 SLC7A7Q9UM01 511 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 PROCRQ9UNN8 238 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 MED31Q9Y3C7 131 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 FAM32AQ9Y421 112 aaKnown RBP4.52□□□□□ -1.69
HDAC6-223ENST00000480525 MAGED1Q9Y5V3 778 aaPredicted RBP4.52□□□□□ -1.69
HDAC6-223ENST00000480525 PRR14LQ5THK1 2151 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 ROS1P08922 2347 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 SETXQ7Z333 2677 aaKnown RBP4.52□□□□□ -1.69
HDAC6-223ENST00000480525 MAST4O15021 2626 aa4.52□□□□□ -1.69
HDAC6-223ENST00000480525 A0A1W2PNR3 127 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 ZC3H12DA2A288 527 aaKnown RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 KDM4EB2RXH2 506 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 H0YC42 278 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 C16orf97H3BN30 126 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 M0R3H8 397 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 PLPP3O14495 311 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 IMPA2O14732 288 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 ARPC3O15145 178 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 KLF4O43474 513 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TRAF3IP2O43734 574 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 IDH3BO43837 385 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 MRPL33O75394 65 aaKnown RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 CLDN1O95832 211 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TXNDC12O95881 172 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 OPN1SWP03999 348 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 H1F0P07305 194 aaKnown RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TFPIP10646 304 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 ZNF43P17038 809 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 GSTM3P21266 225 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 FPR1P21462 350 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 BMP5P22003 454 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 FPR3P25089 353 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 MPGP29372 298 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 UGT2B10P36537 528 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 CPA2P48052 419 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 CENPAP49450 140 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 DAP3P51398 398 aaKnown RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 NR1H2P55055 460 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TPD52P55327 224 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 VLDLRP98155 873 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 SRYQ05066 204 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 CHRNB3Q05901 458 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 COX10Q12887 443 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 FOXF2Q12947 444 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 PIN1Q13526 163 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 FLOT2Q14254 428 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TIMM23BQ5SRD1 257 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 SFRP5Q5T4F7 317 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 GPR139Q6DWJ6 353 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TMEM225Q6GV28 225 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 ADAM5Q6NVV9 412 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 C1orf94Q6P1W5 598 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 WDR88Q6ZMY6 472 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 RINLQ6ZS11 566 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 SLC46A3Q7Z3Q1 461 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 VTCN1Q7Z7D3 282 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TSPYL5Q86VY4 417 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 EPHX4Q8IUS5 362 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 LIX1LQ8IVB5 337 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 CDK20Q8IZL9 346 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TMEM123Q8N131 208 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 ZIC4Q8N9L1 334 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 OR9K2Q8NGE7 335 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 OR10Q1Q8NGQ4 319 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 SLC7A13Q8TCU3 470 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 ABHD3Q8WU67 409 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 IPCEF1Q8WWN9 437 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 HSD17B8Q92506 261 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TAAR8Q969N4 342 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 APH1AQ96BI3 265 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 BPIFA2Q96DR5 249 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 KTI12Q96EK9 354 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 TPD52L3Q96J77 140 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 RADILQ96JH8 1075 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 MUS81Q96NY9 551 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 WFDC6Q9BQY6 131 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 DGCR6LQ9BY27 220 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 GRIP2Q9C0E4 1043 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 OR11A1Q9GZK7 315 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 SLCO5A1Q9H2Y9 848 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 NGBQ9NPG2 151 aa4.51□□□□□ -1.69
HDAC6-223ENST00000480525 NPDC1Q9NQX5 325 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-223ENST00000480525 CCM2LQ9NUG4 571 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms