RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 SLC2A6Q9UGQ3 507 aa5.94□□□□□ -1.46
GAPVD1-217ENST00000479511 PITPNC1Q9UKF7 332 aa5.94□□□□□ -1.46
GAPVD1-217ENST00000479511 IKZF2Q9UKS7 526 aa5.94□□□□□ -1.46
GAPVD1-217ENST00000479511 RNF24Q9Y225 148 aa5.94□□□□□ -1.46
GAPVD1-217ENST00000479511 PEX16Q9Y5Y5 336 aa5.94□□□□□ -1.46
GAPVD1-217ENST00000479511 CCDC171Q6TFL3 1326 aa5.94□□□□□ -1.46
GAPVD1-217ENST00000479511 ZSWIM8A7E2V4 1837 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 IGLV4-3A0A075B6K6 122 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 IGHV3OR16-12A0A075B7B8 117 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 FRG2CA6NGY1 282 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 GOLGA8SH3BPF8 625 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 NTN3O00634 580 aaPredicted RBP5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 RNF113AO15541 343 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 PFKFB2O60825 505 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 P04436 131 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 KITLGP21583 273 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 IDSP22304 550 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 XCR1P46094 333 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 CSNK1EP49674 416 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 RIDAP52758 137 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 CLDN8P56748 225 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 VLDLRP98155 873 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 SBK1Q52WX2 424 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 KIAA1161Q6NSJ0 714 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 ARNTL2Q8WYA1 636 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 TMEM80Q96HE8 168 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 TSNARE1Q96NA8 513 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 TGS1Q96RS0 853 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 MBOAT4Q96T53 435 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 PPDPFQ9H3Y8 114 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 EXOSC3Q9NQT5 275 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 EHFQ9NZC4 300 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 ANGPTL2Q9UKU9 493 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 ERVW-1Q9UQF0 538 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 STARD10Q9Y365 291 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 DDX60LQ5H9U9 1706 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 ARAP2Q8WZ64 1704 aa5.93□□□□□ -1.46
GAPVD1-217ENST00000479511 RPL37AP8A6NKH3 93 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 NR5A2O00482 541 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 ETV5P41161 510 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 SSR1P43307 286 aaKnown RBP5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 CRYBB1P53674 252 aaPredicted RBP5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 RGS8P57771 180 aaPredicted RBP5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 PUDPQ08623 228 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 MAB21L1Q13394 359 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 ILKQ13418 452 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 TGFBIQ15582 683 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 CHRNA6Q15825 494 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 ZNF77Q15935 545 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 MRPL23Q16540 153 aaKnown RBP5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 TRIM16LQ309B1 348 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 TTC19Q6DKK2 380 aaPredicted RBP5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 TMEM53Q6P2H8 277 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 OR4C5Q8NGB2 326 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 OR52H1Q8NGJ2 320 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 IL1F10Q8WWZ1 152 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 ANP32BQ92688 251 aaKnown RBP5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 OPTNQ96CV9 577 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 SERAC1Q96JX3 654 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 C9orf85Q96MD7 179 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 LITAFQ99732 161 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 HCAR1Q9BXC0 346 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 IQCGQ9H095 443 aaKnown RBP5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 SLITRK2Q9H156 845 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 PPA2Q9H2U2 334 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 TBC1D24Q9ULP9 559 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 L3MBTL1Q9Y468 752 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 EYSQ5T1H1 3165 aa5.92□□□□□ -1.46
GAPVD1-217ENST00000479511 LRRC37A2A6NM11 1700 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 FOXI3A8MTJ6 420 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 GOLGA8TH3BQL2 631 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 CXCL13O43927 109 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 SLITRK3O94933 977 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 H6PDO95479 791 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 TMEM50AO95807 157 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 SERPINA2P20848 420 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 ETV1P50549 477 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 CARD18P57730 90 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 TIMM10P62072 90 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 HIKESHIQ53FT3 197 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 AGBL2Q5U5Z8 902 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 SLC8B1Q6J4K2 584 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 ARMCX5Q6P1M9 558 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 RNF130Q86XS8 419 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 KLHDC8BQ8IXV7 354 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 ACMSDQ8TDX5 336 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 NRGNQ92686 78 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 SLC38A4Q969I6 547 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 NUS1Q96E22 293 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 CLCC1Q96S66 551 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 C20orf24Q9BUV8 137 aa5.91□□□□□ -1.46
GAPVD1-217ENST00000479511 MYH13Q9UKX3 1938 aa5.9□□□□□ -1.46
GAPVD1-217ENST00000479511 IGKV2D-30A0A075B6S6 120 aa5.9□□□□□ -1.46
GAPVD1-217ENST00000479511 TRAV25A0A0B4J276 109 aa5.9□□□□□ -1.46
GAPVD1-217ENST00000479511 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.9□□□□□ -1.46
GAPVD1-217ENST00000479511 PRKYO43930 277 aa5.9□□□□□ -1.46
GAPVD1-217ENST00000479511 OR2F2O95006 317 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms