RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 COPZ2Q9P299 210 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 NUFIP1Q9UHK0 495 aaKnown RBP3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 TBC1D24Q9ULP9 559 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 SPATA2Q9UM82 520 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 COPS3Q9UNS2 423 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 SAMD4AQ9UPU9 718 aaKnown RBP3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 TCF19Q9Y242 345 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 FIS1Q9Y3D6 152 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 LRP12Q9Y561 859 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 KLK4Q9Y5K2 254 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 SHROOM3Q8TF72 1996 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 NRCAMQ92823 1304 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 MTCL1Q9Y4B5 1905 aaKnown RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 PATJQ8NI35 1801 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 WASHC1A8K0Z3 465 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 PMS2P5A8MQ11 134 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 B4DXG7 233 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 C2CD4DB7Z1M9 353 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 F8VVB4 439 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 F8VWA3 439 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 BLOC1S5-TXNDC5H3BN57 136 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 FXYD1O00168 92 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 B4GAT1O43505 415 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 PCDH7O60245 1069 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 MPZL2O60487 215 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SCN2BO60939 215 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF432O94892 652 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 LALBAP00709 142 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 NGFP01138 241 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 HLA-DQB1P01920 261 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 HOXD4P09016 255 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 TSPAN19P0C672 248 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 IL1RNP18510 177 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 GGT1P19440 569 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 LHCGRP22888 699 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 GADD45AP24522 165 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 MIPP30301 263 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SFNP31947 248 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 NKX2-1P43699 371 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ACOT2P49753 483 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 MEOX2P50222 304 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 PRMT2P55345 433 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 BTG1P62324 171 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 PPP3R1P63098 170 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 PSPHP78330 225 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 KCNJ10P78508 379 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 CSTF1Q05048 431 aaKnown RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 EMC2Q15006 297 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 MAD2L1BPQ15013 274 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 NCF4Q15080 339 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SF3A2Q15428 464 aaKnown RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 HKDC1Q2TB90 917 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF699Q32M78 642 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ATP6AP1LQ52LC2 224 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 CDKL4Q5MAI5 379 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 NXNL2Q5VZ03 156 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 BSPRYQ5W0U4 402 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM166AQ6J272 317 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ANGPTL8Q6UXH0 198 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 RTL4Q6ZR62 310 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM92BQ6ZTR7 304 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 BTN2A1Q7KYR7 527 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC16A9Q7RTY1 509 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ANKRD33Q7Z3H0 272 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ADGRD2Q7Z7M1 963 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 IFNEQ86WN2 208 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 TMEM17Q86X19 198 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SPAG16Q8N0X2 631 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ATPAF2Q8N5M1 289 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 DNAAF3Q8N9W5 541 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 UXS1Q8NBZ7 420 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF680Q8NEM1 530 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR52E4Q8NGH9 312 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR6S1Q8NH40 331 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SPPL2BQ8TCT7 592 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF675Q8TD23 568 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF606Q8WXB4 792 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 HGDQ93099 445 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 MARC2Q969Z3 335 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 MYLPFQ96A32 169 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 C18orf25Q96B23 403 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ATXN7L3BQ96GX2 97 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 FOPNLQ96NB1 174 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF285Q96NJ3 590 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 NOTCH4Q99466 2003 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 PITX2Q99697 317 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF436Q9C0F3 470 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SRRQ9GZT4 340 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SHARPINQ9H0F6 387 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 UCK1Q9HA47 277 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 IL1RL2Q9HB29 575 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 SDHAF3Q9NRP4 125 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 RBFOX1Q9NWB1 397 aaKnown RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ERVK-18Q9QC07 812 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 C19orf25Q9UFG5 118 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 IKZF3Q9UKT9 509 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 GINS2Q9Y248 185 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 ALG5Q9Y673 324 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 AP1M2Q9Y6Q5 423 aa3.91□□□□□ -1.78
HMGB1P16-201ENST00000447155 V9GYQ6 96 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms