RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CHRM4P08173 479 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 RNH1P13489 461 aaKnown RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 ZNF8P17098 575 aaPredicted RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 DCTDP32321 178 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 MPEG1Q2M385 716 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 FBXW12Q6X9E4 464 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 NPAS4Q8IUM7 802 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 KLHDC1Q8N7A1 406 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 OR4K15Q8NH41 348 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 SLC38A5Q8WUX1 472 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 TMEM106AQ96A25 262 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 RBMXL1Q96E39 390 aaKnown RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 KLRG1Q96E93 195 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 SPACA7Q96KW9 195 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 NICN1Q9BSH3 213 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 POLMQ9NP87 494 aaPredicted RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 LYRM2Q9NU23 88 aaPredicted RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 TREM2Q9NZC2 230 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 FAM96BQ9Y3D0 163 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 C7orf66A4D0T2 115 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 FAM171A2A8MVW0 826 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 GRXCR1A8MXD5 290 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 POP7O75817 140 aaKnown RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 H2AFB1P0C5Y9 115 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 RPA2P15927 270 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 NFYBP25208 207 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 ITGB7P26010 798 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 HNRNPA3P51991 378 aaKnown RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 OR10A3P58181 314 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 TOMM34Q15785 309 aaPredicted RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 VRK3Q8IV63 474 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 OLIG1Q8TAK6 271 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 FGF20Q9NP95 211 aaPredicted RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 TMEM100Q9NV29 134 aa9.59□□□□□ -0.87
LIN54-202ENST00000442461 PLEKHB1Q9UF11 243 aaPredicted RBP9.59□□□□□ -0.87
LIN54-202ENST00000442461 IFT172Q9UG01 1749 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 CCL15-CCL14A0A0B4J2E2 113 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 C1orf226A1L170 272 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 PYCARD-AS1I3L0S3 204 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 CXCL11O14625 94 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 NDUFB6O95139 128 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 PLGP00747 810 aaPredicted RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 SELENOPP49908 381 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 CXCL9Q07325 125 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 SYPL1Q16563 259 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 CCL15Q16663 113 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 ZNF792Q3KQV3 632 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 YOD1Q5VVQ6 348 aaPredicted RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 ACSM5Q6NUN0 579 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 NXPE4Q6UWF7 544 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 TMEM207Q6UWW9 146 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 ZNF695Q8IW36 515 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 MTMR14Q8NCE2 650 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 OR4K14Q8NGD5 310 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 MITD1Q8WV92 249 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 LCN9Q8WX39 176 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 EXTL1Q92935 676 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 FZD3Q9NPG1 666 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 COLEC10Q9Y6Z7 277 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 SLC31A2O15432 143 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 RPLP1P05386 114 aaKnown RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 ASGR1P07306 291 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 DDTP30046 118 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 LIMK1P53667 647 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 TAS2R30P59541 319 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 ZNF280AP59817 542 aaPredicted RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 SLC17A1Q14916 467 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 MPPED2Q15777 294 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 ZNF74Q16587 644 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 GLYR1Q49A26 553 aaPredicted RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 MANEALQ5VSG8 457 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 LAS2Q8IYD9 372 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 PHOSPHO1Q8TCT1 267 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 CDS1Q92903 461 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 PARD6AQ9NPB6 346 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 IL17CQ9P0M4 197 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 CXXC1Q9P0U4 656 aaPredicted RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 NTMQ9P121 344 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 USP36Q9P275 1121 aaKnown RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 KLK11Q9UBX7 282 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 TBC1D3EA0A087X179 549 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 NPIPA5E9PKD4 350 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 BRINP1O60477 761 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 APOA2P02652 100 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 STATHP02808 62 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 ZNF16P17020 682 aaPredicted RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 FOXO1Q12778 655 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 ZC3H14Q6PJT7 736 aaKnown RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 LMLNQ96KR4 655 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 CCNL2Q96S94 520 aaPredicted RBP9.58□□□□□ -0.88
LIN54-202ENST00000442461 MCOLN1Q9GZU1 580 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 ZNF586Q9NXT0 402 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 C5AR2Q9P296 337 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 FBXO10Q9UK96 956 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 NPIPA1Q9UND3 350 aa9.58□□□□□ -0.88
LIN54-202ENST00000442461 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.57□□□□□ -0.88
LIN54-202ENST00000442461 hCG_1809904A0A1W2PP81 198 aa9.57□□□□□ -0.88
LIN54-202ENST00000442461 A0A1W2PR64 198 aa9.57□□□□□ -0.88
LIN54-202ENST00000442461 A0A1W2PRV1 198 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms