RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 SLCO1B7G3V0H7 640 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 CECR9P0C854 216 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 PNMTP11086 282 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 HOXB1P14653 301 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 SRD5A1P18405 259 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 GTF2E2P29084 291 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 THBS2P35442 1172 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 SH3BGRP55822 239 aaPredicted RBP13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 ROR2Q01974 943 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 EFNB3Q15768 340 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 ADIPOQQ15848 244 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 KRTAP24-1Q3LI83 254 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 C3orf36Q3SXR2 165 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 GTDC1Q4AE62 458 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 ZNF311Q5JNZ3 666 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 KDM8Q8N371 416 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 MSI2Q96DH6 328 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 ITCHQ96J02 903 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 PARD6BQ9BYG5 372 aa13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 THUMPD1Q9NXG2 353 aaKnown RBP13.16□□□□□ -0.3
CSNK1E-208ENST00000431611 SNNO75324 88 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 IGLV1-44P01699 117 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 ZNF43P17038 809 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 RPS5P46782 204 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 CLDN17P56750 224 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 WDR4P57081 412 aaKnown RBP13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 IQCCQ4KMZ1 466 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 C6orf10Q5SRN2 563 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 FAM120AOSQ5T036 256 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 MSANTD1Q6ZTZ1 278 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 CROCCP2Q86T23 111 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 FAM169BQ8N8A8 192 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 ZNF540Q8NDQ6 660 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 OR4F15Q8NGB8 312 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 PTDSS2Q9BVG9 487 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 NELFAQ9H3P2 528 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 PLK3Q9H4B4 646 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 SEC61A2Q9H9S3 476 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 ZIM2Q9NZV7 527 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 FBXO9Q9UK97 447 aaPredicted RBP13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 RCE1Q9Y256 329 aa13.15□□□□□ -0.3
CSNK1E-208ENST00000431611 VSTM5A8MXK1 200 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 RPL36A-HNRNPH2H7BZ11 118 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 SLC43A1O75387 559 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 TGFAP01135 160 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 CBR1P16152 277 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 ZNF23P17027 643 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 HNF1AP20823 631 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 CALCRP30988 508 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 PPOXP50336 477 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 IDH3GP51553 393 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 ARF1P84077 181 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 HOXC5Q00444 222 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 EGR4Q05215 589 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 C1DQ13901 141 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 ANKK1Q8NFD2 765 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 NUP37Q8NFH4 326 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 MGARPQ8TDB4 240 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 SLC35B4Q969S0 331 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 VPS33AQ96AX1 596 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 KTI12Q96EK9 354 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 MAELQ96JY0 434 aaKnown RBP13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 OXGR1Q96P68 337 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 BPESC1Q9GZL8 116 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 BCL2L10Q9HD36 194 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 SDR39U1Q9NRG7 319 aaPredicted RBP13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 RPS6KB2Q9UBS0 482 aa13.14□□□□□ -0.31
CSNK1E-208ENST00000431611 TMEM120BA0PK00 339 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 ZNF432O94892 652 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 NUDT7P0C024 238 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 NPR2P20594 1047 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 THBS4P35443 961 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 POLR2JP52435 117 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 HGFACQ04756 655 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 SLC9B1Q4ZJI4 515 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 GPR137CQ8N3F9 429 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 BBS10Q8TAM1 723 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 ZNF442Q9H7R0 627 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 SEC14L4Q9UDX3 406 aa13.13□□□□□ -0.31
CSNK1E-208ENST00000431611 C5orf58C9J3I9 102 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 hCG_2039718K7EN88 272 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 CLIC1O00299 241 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 AIM2O14862 343 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 UBDO15205 165 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 OR2T1O43869 369 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 STAMBPO95630 424 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 ERCC1P07992 297 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 CELA3BP08861 270 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 DAOP14920 347 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 ARR3P36575 388 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 RGNQ15493 299 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 SPATA21Q7Z572 469 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 MYPOPQ86VE0 399 aaPredicted RBP13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 MIER2Q8N344 545 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 PIK3C3Q8NEB9 887 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 OR9I1Q8NGQ6 314 aa13.12□□□□□ -0.31
CSNK1E-208ENST00000431611 NEU4Q8WWR8 484 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms