RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ZNF627Q7L945 461 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 OLIG3Q7RTU3 272 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 PIGWQ7Z7B1 504 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 CCDC103Q8IW40 242 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 UEVLDQ8IX04 471 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 SLC15A3Q8IY34 581 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 C1orf174Q8IYL3 243 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 MICU2Q8IYU8 434 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ZIC4Q8N9L1 334 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 OR5J2Q8NH18 312 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ADAMTS16Q8TE57 1224 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 TMEM171Q8WVE6 324 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 FBXW5Q969U6 566 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 S100PBPQ96BU1 408 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 PIK3IP1Q96FE7 263 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 THOC1Q96FV9 657 aaKnown RBP5.64□□□□□ -1.51
USP54-202ENST00000413442 LRRC37BQ96QE4 947 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ZNF300Q96RE9 604 aaPredicted RBP5.64□□□□□ -1.51
USP54-202ENST00000413442 ELAC2Q9BQ52 826 aaKnown RBP5.64□□□□□ -1.51
USP54-202ENST00000413442 WACQ9BTA9 647 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 BDH2Q9BUT1 245 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ZNF426Q9BUY5 554 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 NDEL1Q9GZM8 345 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 MYLK2Q9H1R3 596 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 GORASP2Q9H8Y8 452 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 NANSQ9NR45 359 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 C6orf203Q9P0P8 240 aaPredicted RBP5.64□□□□□ -1.51
USP54-202ENST00000413442 ZNF229Q9UJW7 825 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 SH3GLB1Q9Y371 365 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 RNF115Q9Y4L5 304 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 FREM1Q5H8C1 2179 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 DSCAMO60469 2012 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 HEATR1Q9H583 2144 aaKnown RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 CREBBPQ92793 2442 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 ANKHD1Q8IWZ3 2542 aaKnown RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 ARPC4-TTLL3A0A0A6YYG9 625 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 IGHV3-15A0A0B4J1V0 119 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 ZC3H12DA2A288 527 aaKnown RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 MS4A18H0YCH9 400 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 FXYD1O00168 92 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 HS3ST1O14792 307 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 AHCYL1O43865 530 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 SMPD2O60906 423 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 ZNF432O94892 652 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 PTHP01270 115 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 MT-ND1P03886 318 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 NQO1P15559 274 aaKnown RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 CD53P19397 219 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 ARR3P36575 388 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 RPS5P46782 204 aaKnown RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 P2RY4P51582 365 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 SLC7A2P52569 658 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 CDH12P55289 794 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 CHRNB3Q05901 458 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 PUDPQ08623 228 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 MS4A18Q3C1V0 323 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 GKAP1Q5VSY0 366 aaPredicted RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 HMBOX1Q6NT76 420 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 ZNF544Q6NX49 715 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 PLXDC2Q6UX71 529 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 ZNF704Q6ZNC4 412 aaPredicted RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 RRM2BQ7LG56 351 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 PIWIL3Q7Z3Z3 882 aaKnown RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 GPAT4Q86UL3 456 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 CYP4Z1Q86W10 505 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 TGIF2LYQ8IUE0 185 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 EPHX4Q8IUS5 362 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 LURAP1LQ8IV03 231 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 GPR137CQ8N3F9 429 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 GPR32P1Q8NGA4 272 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 OR6T1Q8NGN1 323 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 OR6X1Q8NH79 312 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 TAAR8Q969N4 342 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 SLC25A36Q96CQ1 311 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 KTI12Q96EK9 354 aaPredicted RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 PLPPR2Q96GM1 343 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 PTDSS2Q9BVG9 487 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 GSX2Q9BZM3 304 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 ALG2Q9H553 416 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 BARX1Q9HBU1 254 aaPredicted RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 SPAG4Q9NPE6 437 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 KRCC1Q9NPI7 259 aaPredicted RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 SLC17A5Q9NRA2 495 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 SLC7A10Q9NS82 523 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 CCM2LQ9NUG4 571 aaPredicted RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 ZNF701Q9NV72 531 aaPredicted RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 ABCD2Q9UBJ2 740 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 PRSS50Q9UI38 385 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 RIMS3Q9UJD0 308 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 SAMD4AQ9UPU9 718 aaKnown RBP5.63□□□□□ -1.51
USP54-202ENST00000413442 MED31Q9Y3C7 131 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 SLC25A15Q9Y619 301 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 TEX15Q9BXT5 2789 aa5.63□□□□□ -1.51
USP54-202ENST00000413442 RAI1Q7Z5J4 1906 aaPredicted RBP5.62□□□□□ -1.51
USP54-202ENST00000413442 PLPP3O14495 311 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 GSTA4O15217 222 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 TPST2O60704 377 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 LYZL6O75951 148 aa5.62□□□□□ -1.51
USP54-202ENST00000413442 PDE5AO76074 875 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms