RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZNF417Q8TAU3 575 aa15.52■□□□□ 0.08
LSM5-204ENST00000409909 RNF217Q8TC41 542 aa15.52■□□□□ 0.08
LSM5-204ENST00000409909 TAMM41Q96BW9 452 aa15.52■□□□□ 0.08
LSM5-204ENST00000409909 LRRC58Q96CX6 371 aa15.52■□□□□ 0.08
LSM5-204ENST00000409909 ZNF587Q96SQ5 575 aaPredicted RBP15.52■□□□□ 0.08
LSM5-204ENST00000409909 CCDC134Q9H6E4 229 aa15.52■□□□□ 0.08
LSM5-204ENST00000409909 CISD1Q9NZ45 108 aaKnown RBP15.52■□□□□ 0.08
LSM5-204ENST00000409909 MAGED1Q9Y5V3 778 aaPredicted RBP15.52■□□□□ 0.08
LSM5-204ENST00000409909 TLN2Q9Y4G6 2542 aa15.52■□□□□ 0.07
LSM5-204ENST00000409909 TRIM64A6NGJ6 449 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 TRIM64BA6NI03 449 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 UPK3AO75631 287 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 ZNF432O94892 652 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 C8BP07358 591 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 INHBBP09529 407 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 PTNP21246 168 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 CD40P25942 277 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 GTF2E2P29084 291 aaKnown RBP15.51■□□□□ 0.07
LSM5-204ENST00000409909 CLDN17P56750 224 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 RPS4XP62701 263 aaKnown RBP15.51■□□□□ 0.07
LSM5-204ENST00000409909 TGFBR3Q03167 851 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 VMACQ2NL98 169 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 HIKESHIQ53FT3 197 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 COQ5Q5HYK3 327 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 NIPAL3Q6P499 406 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 KLHL17Q6TDP4 642 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 LINC00114Q6XXX2 140 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 H1FNTQ75WM6 255 aaPredicted RBP15.51■□□□□ 0.07
LSM5-204ENST00000409909 PATL1Q86TB9 770 aaKnown RBP15.51■□□□□ 0.07
LSM5-204ENST00000409909 RANBP3LQ86VV4 465 aaPredicted RBP15.51■□□□□ 0.07
LSM5-204ENST00000409909 TSPYL5Q86VY4 417 aaPredicted RBP15.51■□□□□ 0.07
LSM5-204ENST00000409909 CALHM3Q86XJ0 350 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 SLC30A8Q8IWU4 369 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 C17orf78Q8N4C9 275 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 BOD1Q96IK1 185 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 OXGR1Q96P68 337 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 MCHR1Q99705 422 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 HEATR1Q9H583 2144 aaKnown RBP15.51■□□□□ 0.07
LSM5-204ENST00000409909 EVA1AQ9H8M9 152 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 SELENONQ9NZV5 590 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 USP22Q9UPT9 525 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 B3GALT5Q9Y2C3 310 aa15.51■□□□□ 0.07
LSM5-204ENST00000409909 LOC100653049A0A140TA62 436 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 LOC102725191A0A1B0GVB3 256 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 E7EQL1 145 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 MS4A18H0YCH9 400 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 H7C1Q1 480 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 M0R1B8 84 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 AIM2O14862 343 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 FMO6PO60774 539 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 KRT33AO76009 404 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 KRT34O76011 436 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 LYPD3O95274 346 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 HPRP00739 348 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 BGLAPP02818 100 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 THY1P04216 161 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 ZNF43P17038 809 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 PTAFRP25105 342 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 CDH11P55287 796 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 ATP5J2P56134 94 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 MS4A18Q3C1V0 323 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 SWT1Q5T5J6 900 aaKnown RBP15.5■□□□□ 0.07
LSM5-204ENST00000409909 REP15Q6BDI9 236 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 BIVMQ86UB2 503 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 SNX32Q86XE0 403 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 SLC41A3Q96GZ6 507 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 RADILQ96JH8 1075 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 MOGAT1Q96PD6 335 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 ALKBH3Q96Q83 286 aaPredicted RBP15.5■□□□□ 0.07
LSM5-204ENST00000409909 AMDHD2Q9Y303 409 aa15.5■□□□□ 0.07
LSM5-204ENST00000409909 ZNF587BE7ETH6 402 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 LRRN3E7EW58 273 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 MRASO14807 208 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 CDKN1AP38936 164 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 PRPS1P60891 318 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 MMEL1Q495T6 779 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 ENTPD8Q5MY95 495 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 ZNF613Q6PF04 617 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 SLC22A25Q6T423 547 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 NHLRC1Q6VVB1 395 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 WDR88Q6ZMY6 472 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 CCDC80Q76M96 950 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 ABHD12BQ7Z5M8 362 aaPredicted RBP15.49■□□□□ 0.07
LSM5-204ENST00000409909 OR8J3Q8NGG0 315 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 OR1K1Q8NGR3 316 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 OR6S1Q8NH40 331 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 VANGL1Q8TAA9 524 aaPredicted RBP15.49■□□□□ 0.07
LSM5-204ENST00000409909 COX4I2Q96KJ9 171 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 ZNF583Q96ND8 569 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 ZNF317Q96PQ6 595 aaPredicted RBP15.49■□□□□ 0.07
LSM5-204ENST00000409909 TMEM43Q9BTV4 400 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 TRAF4Q9BUZ4 470 aaPredicted RBP15.49■□□□□ 0.07
LSM5-204ENST00000409909 LINC00470Q9BZP3 86 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 MRGBPQ9NV56 204 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 MGAT4BQ9UQ53 548 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 RCE1Q9Y256 329 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 CSPG4Q6UVK1 2322 aa15.49■□□□□ 0.07
LSM5-204ENST00000409909 OR6C65A6NJZ3 312 aa15.48■□□□□ 0.07
LSM5-204ENST00000409909 CPSF4LA6NMK7 179 aaKnown RBP15.48■□□□□ 0.07
LSM5-204ENST00000409909 BBIP1A8MTZ0 92 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms