RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 FAM111BQ6SJ93 734 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 LDLRAD3Q86YD5 345 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 LNX2Q8N448 690 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 PLPP7Q8NBV4 271 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 OR1M1Q8NGA1 313 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 CCDC107Q8WV48 283 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 TMEM106AQ96A25 262 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 MS4A4EQ96PG1 132 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 ZCCHC4Q9H5U6 513 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 MIOXQ9UGB7 285 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 PURGQ9UJV8 347 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 SLC27A6Q9Y2P4 619 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 PLEKHM1Q9Y4G2 1056 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 OR1A2Q9Y585 309 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 A0A1W2PR48 441 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 A8MXK9 166 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 LEFTY2O00292 366 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 OR6A2O95222 327 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 SERPINA5P05154 406 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 CD2P06729 351 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 GABRA3P34903 492 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 PRLHRP49683 370 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 POLR2GP62487 172 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 ZNF227Q86WZ6 799 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 COMMD2Q86X83 199 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 DIO2Q92813 273 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 FBXO34Q9NWN3 711 aa14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 ZNF443Q9Y2A4 671 aaPredicted RBP14.66□□□□□ -0.06
PRPF40B-201ENST00000261897 MAN2B1O00754 1011 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 EPPINO95925 133 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 HSD17B13Q7Z5P4 300 aaPredicted RBP14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 RNF180Q86T96 592 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 TMEM200AQ86VY9 491 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 JAZF1Q86VZ6 243 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 ALG14Q96F25 216 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 SARGQ9BW04 601 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 SYT4Q9H2B2 425 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 ANKRD19PQ9H560 264 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 CWH43Q9H720 699 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 CTSFQ9UBX1 484 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 PARP14Q460N5 1801 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 NAP1L6A6NFF2 107 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 HPGDP15428 266 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 CPT2P23786 658 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 HOXD10P28358 340 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 NPBWR1P48145 328 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 TRAM1Q15629 374 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 ZNF626Q68DY1 528 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 SLC8B1Q6J4K2 584 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 C3orf33Q6P1S2 294 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 ZNF585AQ6P3V2 769 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 DCUN1D3Q8IWE4 304 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 PPP1R1CQ8WVI7 109 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 TGIF2Q9GZN2 237 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 IL36AQ9UHA7 158 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 OIP5O43482 229 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 EIF3GO75821 320 aaKnown RBP eCLIP14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 HIST1H1CP16403 213 aaKnown RBP14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 CXADRP78310 365 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 PLA2G7Q13093 441 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 ALG10BQ5I7T1 473 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 OR5T2Q8NGG2 359 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 ARL11Q969Q4 196 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 CHMP1AQ9HD42 196 aaPredicted RBP14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 ASH2LQ9UBL3 628 aa14.65□□□□□ -0.06
PRPF40B-201ENST00000261897 MED19A0JLT2 244 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 SLC6A6P31641 620 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 PTGFRP43088 359 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 PGDP52209 483 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 ZNF85Q03923 595 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 DMRTC1Q5HYR2 192 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 HACD4Q5VWC8 232 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 LEG1Q6P5S2 330 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 SLC35D2Q76EJ3 337 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 OR4S1Q8NGB4 309 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 OR1J2Q8NGS2 313 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 ZBTB8AQ96BR9 441 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 SLC35A4Q96G79 324 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 MRPL48Q96GC5 212 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 C11orf49Q9H6J7 331 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 NDRG3Q9UGV2 375 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 GPN3Q9UHW5 284 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 NPIPB8E9PQR5 432 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 ZNF254O75437 659 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 RAB6AP20340 208 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 MAP3K8P41279 467 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 CDK5R1Q15078 307 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 ETV3LQ6ZN32 361 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 FAM122BQ7Z309 247 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 OR5AK2Q8NH90 309 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 HCFC1R1Q9NWW0 138 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 OR5V1Q9UGF6 321 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 ZMIZ1Q9ULJ6 1067 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 A0A0A6YYC8 382 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 I3L1I5 382 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 PLPP2O43688 288 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 OR10H2O60403 315 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 TXNDC12O95881 172 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 F13BP05160 661 aa14.64□□□□□ -0.07
PRPF40B-201ENST00000261897 SFTPBP07988 381 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms