RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SHISA7A6NL88 538 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 F2RP25116 425 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 TAS2R30P59541 319 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 ATPAF1Q5TC12 328 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-201ENST00000225964 SLC46A3Q7Z3Q1 461 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 OR5AS1Q8N127 324 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 BPIFB2Q8N4F0 458 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 UHRF2Q96PU4 802 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 GALNT9Q9HCQ5 603 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 HBA1P69905 142 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 PEA15Q15121 130 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 EXT1Q16394 746 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 OR13H1Q8NG92 308 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 TOX2Q96NM4 488 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 LIN7BQ9HAP6 207 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 HSFX1Q9UBD0 423 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 MRPS28Q9Y2Q9 187 aaKnown RBP12.28□□□□□ -0.44
COL1A1-201ENST00000225964 DVL1O14640 695 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 IMPA2O14732 288 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 SCAF4O95104 1147 aaKnown RBP12.28□□□□□ -0.44
COL1A1-201ENST00000225964 ACP2P11117 423 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 APEHP13798 732 aaKnown RBP12.28□□□□□ -0.44
COL1A1-201ENST00000225964 OPRD1P41143 372 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 P2RX1P51575 399 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 DVL1P1P54792 670 aaPredicted RBP12.28□□□□□ -0.44
COL1A1-201ENST00000225964 EMG1Q92979 244 aaKnown RBP12.28□□□□□ -0.44
COL1A1-201ENST00000225964 HCRTR1O43613 425 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 IGHV3-9P01782 118 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 BMP2P12643 396 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 NDUFB7P17568 137 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 MFGE8Q08431 387 aaPredicted RBP12.28□□□□□ -0.44
COL1A1-201ENST00000225964 NFATC3Q12968 1075 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 SIX1Q15475 284 aaPredicted RBP12.28□□□□□ -0.44
COL1A1-201ENST00000225964 MARCH8Q5T0T0 291 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 NAA40Q86UY6 237 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 TMEM185AQ8NFB2 350 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 OR2T27Q8NH04 317 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 CCDC74AQ96AQ1 378 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 MFFQ9GZY8 342 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 OR51J1Q9H342 316 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 FGF21Q9NSA1 209 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 TRBV4-1A0A0J9YWV2 114 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 CRYM-AS1A6NIL9 109 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 CRYZL1O95825 349 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 CHRNB1P11230 501 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 AGFG1P52594 562 aaKnown RBP12.28□□□□□ -0.44
COL1A1-201ENST00000225964 CAMK2BQ13554 666 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 IL10RAQ13651 578 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 APOOLQ6UXV4 268 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 ZNF813Q6ZN06 617 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 GDPD3Q7L5L3 318 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 PDLIM7Q9NR12 457 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 TREX1Q9NSU2 369 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 PRAMEF25A6NGN4 478 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 P2RY10O00398 339 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 ALOX12BO75342 701 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 ITGAMP11215 1152 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 RPA2P15927 270 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 BCKDHBP21953 392 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 OMGP23515 440 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 FCRLAQ7L513 359 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 FJX1Q86VR8 437 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 METTL4Q8N3J2 472 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 MS4A4AQ96JQ5 239 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 TRIB1Q96RU8 372 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 C1QTNF6Q9BXI9 259 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 AGPAT4Q9NRZ5 378 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 LANCL2Q9NS86 450 aa12.28□□□□□ -0.44
COL1A1-201ENST00000225964 TLCD2A6NGC4 264 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 MED6O75586 246 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 UPK1BO75841 260 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 CLDN1O95832 211 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 OR8U8P0C7N1 319 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 GIFP27352 417 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 SLC1A3P43003 542 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 MRPS10P82664 201 aaKnown RBP12.27□□□□□ -0.44
COL1A1-201ENST00000225964 MFAP5Q13361 173 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 FGFBP1Q14512 234 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 SIRT6Q8N6T7 355 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 IGHV3-20A0A0C4DH32 117 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 TNFRSF10AO00220 468 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 GABRPO00591 440 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 P2RX6O15547 441 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 PRAF2O60831 178 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 MGST1P10620 155 aaKnown RBP12.27□□□□□ -0.44
COL1A1-201ENST00000225964 MRPS34P82930 218 aaKnown RBP12.27□□□□□ -0.44
COL1A1-201ENST00000225964 OGFOD3Q6PK18 319 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 GOT1L1Q8NHS2 421 aaPredicted RBP12.27□□□□□ -0.44
COL1A1-201ENST00000225964 CPNE4Q96A23 557 aaPredicted RBP12.27□□□□□ -0.44
COL1A1-201ENST00000225964 RAB3CQ96E17 227 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 HRH4Q9H3N8 390 aa12.27□□□□□ -0.44
COL1A1-201ENST00000225964 KCNK2O95069 426 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 SSTP61278 116 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 ADAMTSL4Q6UY14 1074 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 IL34Q6ZMJ4 242 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 BATF2Q8N1L9 274 aa12.27□□□□□ -0.45
COL1A1-201ENST00000225964 ZBP1Q9H171 429 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms