RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Nmrk2Q9D7C9 195 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Izumo2Q9DA16 220 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Brix1Q9DCA5 353 aaKnown RBP13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cts8Q9JI81 333 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Ldb3Q9JKS4 723 aaKnown RBP13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Slco1a1Q9QXZ6 670 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Jag2Q9QYE5 1247 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Fam136b-psA0A140T8T1 138 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Xpnpep2B1AVD1 674 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr376E9Q4M1 320 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Hcrtr2P58308 460 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tmprss11cQ1JRP2 431 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 BC030870Q3V2G4 71 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Foxd3Q61060 465 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Fzd7Q61090 572 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cd53Q61451 219 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Sp9Q64HY3 484 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Adam26bQ6IMH6 699 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Znf511Q6P0X2 227 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Shc4Q6S5L9 626 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Hapln3Q80WM5 359 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lpar4Q8BLG2 370 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lacc1Q8BZT9 430 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cbr3Q8K354 277 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Srpx2Q8R054 468 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Vmn1r28Q8R2C9 302 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cd276Q8VE98 316 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr1079Q8VF52 315 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 SostQ99P68 211 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Aaed1Q9D1A0 226 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Mfsd2aQ9DA75 534 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 PmpcaQ9DC61 524 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tnfrsf21Q9EPU5 655 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Dok3Q9QZK7 444 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Ppp1r17Q9Z2E4 159 aa13.53□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr1366A0A1W2P740 328 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Gm5407E9Q7Q1 248 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 S100a2J3QMC7 104 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 OsmrO70458 971 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Gstm5P48774 224 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tbx5P70326 518 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lpar5Q149R9 372 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Ccbe1Q3MI99 408 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Myl12bQ3THE2 172 aaKnown RBP13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Dhrs13Q5SS80 376 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tas2r117Q7M715 330 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Gpatch2Q7TQC7 527 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Znf516Q7TSH3 1157 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Trim69Q80X56 500 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zfp763Q8BIC7 588 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 RhbgQ8BUX5 455 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 IrgcQ8C262 412 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tceal3Q8R0A5 200 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Slc9a8Q8R4D1 576 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr1284Q8VF29 311 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Dapl1Q9D757 107 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tmem176aQ9DCS1 244 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 P2rx4Q9JJX6 388 aa13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tns1E9Q0S6 1888 aaKnown RBP13.52□□□□□ -0.24
Nup88-202ENSMUST00000108530 2610021A01RikE9Q0Q3 834 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Gm3755K7N743 167 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Zfp26P10076 861 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Fcer1aP20489 250 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Ubl4aP21126 157 aaKnown RBP13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 S100a9P31725 113 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Atp6v1e1P50518 226 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 CckbrP56481 453 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Wfdc6aQ3UW55 136 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Nox3Q672J9 568 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 CltbQ6IRU5 229 aaKnown RBP13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Gpr176Q80WT4 515 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Acot4Q8BWN8 421 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Clec2hQ8C1T8 218 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Padi6Q8K3V4 682 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 BphlQ8R164 291 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Rps21Q9CQR2 83 aaKnown RBP13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Plag1Q9QYE0 499 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 HaspinQ9Z0R0 754 aa13.52□□□□□ -0.25
Nup88-202ENSMUST00000108530 Gm21865A0A087WRL2 222 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Slc37a4A0A1L1SUI3 450 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Zfp362B1ASA5 418 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Btbd16E9Q173 522 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Fthl17dQ3SXD1 176 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Ipcef1Q5DU31 406 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Laptm5Q61168 261 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Ptp4a1Q63739 173 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Tubg2Q8VCK3 451 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr668Q8VGW3 318 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Siglec5Q920G3 569 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Fthl17Q99MX2 176 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 IqchQ9D2K4 1071 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Ca13Q9D6N1 262 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Slc9a3r2Q9JHL1 337 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Rnf32Q9JIT1 368 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Akip1Q9JJR5 212 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Olfr2Q9QWU6 327 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Ubqln2Q9QZM0 638 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Spo11Q9WTK8 396 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Gm9008E9PVG0 424 aa13.51□□□□□ -0.25
Nup88-202ENSMUST00000108530 Vmn2r101E9PZS9 857 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 89.6 ms