RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 LIN28AQ9H9Z2 209 aaKnown RBP8.82□□□□□ -1
PHGDH-215ENST00000641371 SH2D2AQ9NP31 389 aa8.82□□□□□ -1
PHGDH-215ENST00000641371 FOXJ2Q9P0K8 574 aa8.82□□□□□ -1
PHGDH-215ENST00000641371 GRHPRQ9UBQ7 328 aa8.82□□□□□ -1
PHGDH-215ENST00000641371 B3GALT5Q9Y2C3 310 aa8.82□□□□□ -1
PHGDH-215ENST00000641371 GPR52Q9Y2T5 361 aa8.82□□□□□ -1
PHGDH-215ENST00000641371 CAB39Q9Y376 341 aaPredicted RBP8.82□□□□□ -1
PHGDH-215ENST00000641371 MRPS18CQ9Y3D5 142 aaKnown RBP8.82□□□□□ -1
PHGDH-215ENST00000641371 HDGFL3Q9Y3E1 203 aa8.82□□□□□ -1
PHGDH-215ENST00000641371 NOX1Q9Y5S8 564 aa8.82□□□□□ -1
PHGDH-215ENST00000641371 TMEM72A0PK05 275 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 A6NIZ1 184 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 GJE1A6NN92 205 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 BLOC1S5-TXNDC5H3BN57 136 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 LINC01387J3KSC0 135 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 XKRYO14609 159 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 GNB5O14775 395 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 CBR3O75828 277 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 DXOO77932 396 aaKnown RBP8.81□□□□□ -1
PHGDH-215ENST00000641371 PTHP01270 115 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 LCKP06239 509 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 GALP22466 123 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 PSMA1P25786 263 aaKnown RBP8.81□□□□□ -1
PHGDH-215ENST00000641371 IDUAP35475 653 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 RGS6P49758 472 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 DAP3P51398 398 aaKnown RBP8.81□□□□□ -1
PHGDH-215ENST00000641371 FOXL2P58012 376 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 CTXN1P60606 82 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 RAP1BP61224 184 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 RPS7P62081 194 aaKnown RBP8.81□□□□□ -1
PHGDH-215ENST00000641371 ACTA2P62736 377 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 RAP1AP62834 184 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 ACTG2P63267 376 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 GABREP78334 506 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 NFATC3Q12968 1075 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 MRPL28Q13084 256 aaKnown RBP8.81□□□□□ -1
PHGDH-215ENST00000641371 DYNC1I2Q13409 638 aaKnown RBP8.81□□□□□ -1
PHGDH-215ENST00000641371 CRMP1Q14194 572 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 PON3Q15166 354 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 TRAM1Q15629 374 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 PLPPR5Q32ZL2 321 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 DNM1P34Q6PK57 102 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 IL20RBQ6UXL0 311 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 IL22RA1Q8N6P7 574 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 LRRC75AQ8NAA5 344 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 OR52E2Q8NGJ4 325 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 OR1J4Q8NGS1 313 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 OR2T4Q8NH00 348 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 THAP4Q8WY91 577 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 TAAR8Q969N4 342 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 NTNG2Q96CW9 530 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 KTI12Q96EK9 354 aaPredicted RBP8.81□□□□□ -1
PHGDH-215ENST00000641371 TEAD3Q99594 435 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 RHNO1Q9BSD3 238 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 KATNB1Q9BVA0 655 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 RTN4RQ9BZR6 473 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 FANCFQ9NPI8 374 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 INIPQ9NRY2 104 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 ALKBH4Q9NXW9 302 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 LSM2Q9Y333 95 aaKnown RBP8.81□□□□□ -1
PHGDH-215ENST00000641371 IER3IP1Q9Y5U9 82 aa8.81□□□□□ -1
PHGDH-215ENST00000641371 USP34Q70CQ2 3546 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 ARPC4-TTLL3A0A0A6YYG9 625 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 A0A1W2PRG6 482 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 HSPB2A8KAH6 182 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 CDRT15L2A8MXV6 281 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 MCIDASD6RGH6 385 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 PHYHO14832 338 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 DNPH1O43598 174 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 AIREO43918 545 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 ZNF354AO60765 605 aaPredicted RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 GLCEO94923 617 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 SBK2P0C263 348 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 OR2T7P0C7T2 308 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 NR2C1P13056 603 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 HIST1H1CP16403 213 aaKnown RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 CPEP16870 476 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 SLC2A5P22732 501 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 AQP2P41181 271 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 RPS5P46782 204 aaKnown RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 CYB561P49447 251 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 RPL18Q07020 188 aaKnown RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 KRR1Q13601 381 aaKnown RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 TOMM34Q15785 309 aaPredicted RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 HSPB2Q16082 182 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 ZNF239Q16600 458 aaKnown RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 DGUOKQ16854 277 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 KLHL12Q53G59 568 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 ACER2Q5QJU3 275 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 SLC35F1Q5T1Q4 408 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 ABHD17BQ5VST6 288 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 DESI1Q6ICB0 168 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 C19orf48Q6RUI8 117 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 C16orf47Q6ZP98 133 aaPredicted RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 USP43Q70EL4 1123 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 H1FNTQ75WM6 255 aaPredicted RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 FAM122BQ7Z309 247 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 GTPBP8Q8N3Z3 284 aaPredicted RBP8.8□□□□□ -1
PHGDH-215ENST00000641371 CLEC1AQ8NC01 280 aa8.8□□□□□ -1
PHGDH-215ENST00000641371 NPEPL1Q8NDH3 523 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms