RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SEC14L4Q9UDX3 406 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 SLC13A4Q9UKG4 626 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 USP22Q9UPT9 525 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 CAPN7Q9Y6W3 813 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 DSCAMO60469 2012 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 ALPK2Q86TB3 2170 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 OR5H1A6NKK0 313 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 FMO6PO60774 539 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 VAMP5O95183 116 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 CDH12P55289 794 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 NCALDP61601 193 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 STK11Q15831 433 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 TIMM23BQ5SRD1 257 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 NCMAPQ5T1S8 102 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 FAM69AQ5T7M9 428 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 INTS11Q5TA45 600 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 C5orf46Q6UWT4 87 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 CREB3L2Q70SY1 520 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 P2RY8Q86VZ1 359 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 RBM45Q8IUH3 476 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 EPHX4Q8IUS5 362 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 KDM8Q8N371 416 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 LILRB1Q8NHL6 650 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 MUS81Q96NY9 551 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 MCHR1Q99705 422 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 TAS2R16Q9NYV7 291 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 RASD1Q9Y272 281 aa16.28■□□□□ 0.2
SHKBP1-202ENST00000593764 ACANP16112 2415 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 OR2T1O43869 369 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 RAD51DO75771 328 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 PPA1Q15181 289 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 LINC00114Q6XXX2 140 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 AAED1Q7RTV5 226 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 RANBP3LQ86VV4 465 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 TSPYL5Q86VY4 417 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 POU5F2Q8N7G0 328 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 PCYOX1LQ8NBM8 494 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 IGFBPL1Q8WX77 278 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 NGBQ9NPG2 151 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 BEX4Q9NWD9 120 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 GID8Q9NWU2 228 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 NPAP1Q9NZP6 1156 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 B3GAT1Q9P2W7 334 aa16.27■□□□□ 0.2
SHKBP1-202ENST00000593764 TRAV36DV7A0A075B6V5 113 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 CIB4A0PJX0 185 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 DPRXA6NFQ7 191 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 CCT8L1PA6NM43 557 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 LYPD3O95274 346 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 THY1P04216 161 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 HOXC12P31275 282 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 SEC24CP53992 1094 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 ADAM8P78325 824 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 LTBQ06643 244 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 VEZF1Q14119 521 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 GABRA6Q16445 453 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 SWT1Q5T5J6 900 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 ZNF613Q6PF04 617 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 C20orf204Q6ZNR8 217 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 RP9Q8TA86 221 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 RCN3Q96D15 328 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 MUCL1Q96DR8 90 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 PIP5K1AQ99755 562 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 AMBRA1Q9C0C7 1298 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 UPB1Q9UBR1 384 aa16.26■□□□□ 0.19
SHKBP1-202ENST00000593764 MTORP42345 2549 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 M0R082 166 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 BGLAPP02818 100 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 GRPRP30550 384 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 SELENOPP49908 381 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 BSPH1Q075Z2 132 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 LGALS3BPQ08380 585 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 ENTPD8Q5MY95 495 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 C9orf135Q5VTT2 229 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 ADAM5Q6NVV9 412 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 WDR88Q6ZMY6 472 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 TREML1Q86YW5 311 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 TGIF2LYQ8IUE0 185 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 KRTAP1-3Q8IUG1 177 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 WDR31Q8NA23 367 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 POMGNT2Q8NAT1 580 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 OR6S1Q8NH40 331 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 ZNF417Q8TAU3 575 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 RNF217Q8TC41 542 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 SLC26A7Q8TE54 656 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 PIGTQ969N2 578 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 OXGR1Q96P68 337 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 ZNF587Q96SQ5 575 aaPredicted RBP16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 ELAC2Q9BQ52 826 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 TMEM43Q9BTV4 400 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 TMUB1Q9BVT8 246 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 PCDHAC1Q9H158 963 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 SLCO5A1Q9H2Y9 848 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 ESRP2Q9H6T0 727 aaKnown RBP16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 SELENONQ9NZV5 590 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 B3GALT5Q9Y2C3 310 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 RNF115Q9Y4L5 304 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 SLC25A15Q9Y619 301 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 USF3Q68DE3 2245 aa16.25■□□□□ 0.19
SHKBP1-202ENST00000593764 LOC102725191A0A1B0GVB3 256 aa16.24■□□□□ 0.19
SHKBP1-202ENST00000593764 CPSF4LA6NMK7 179 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms