RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 OGDHQ02218 1023 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 OVGP1Q12889 678 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 ELOCQ15369 112 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 FAM199XQ6PEV8 388 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-219ENST00000556413 LRRC31Q6UY01 552 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 FAM92BQ6ZTR7 304 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 CYP4V2Q6ZWL3 525 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-219ENST00000556413 HSD11B1LQ7Z5J1 315 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 TMEM110Q86TL2 294 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 ASPGQ86U10 573 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 GKN2Q86XP6 184 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 KLHDC8AQ8IYD2 350 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 TRPV3Q8NET8 790 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 OR2AP1Q8NGE2 309 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 OR56A4Q8NGH8 313 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 OR4F5Q8NH21 305 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 SLC37A2Q8TED4 501 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 CT55Q8WUE5 264 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 FAM172AQ8WUF8 416 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 RXFP2Q8WXD0 754 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 NAT6Q93015 286 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 SNRNP40Q96DI7 357 aaKnown RBP2.21□□□□□ -2.06
SCFD1-219ENST00000556413 TBC1D31Q96DN5 1066 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 RAB3CQ96E17 227 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 CCDC114Q96M63 670 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 MCEEQ96PE7 176 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 TGM7Q96PF1 710 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PEBP4Q96S96 227 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 RTBDNQ9BSG5 229 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-219ENST00000556413 CLSTN2Q9H4D0 955 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PIEZO2Q9H5I5 2752 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 THAP9Q9H5L6 903 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 ISG20L2Q9H9L3 353 aaKnown RBP2.21□□□□□ -2.06
SCFD1-219ENST00000556413 AMBNQ9NP70 447 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 ETNK2Q9NVF9 386 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PLEK2Q9NYT0 353 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PCSK1NQ9UHG2 260 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 SH3BGRL2Q9UJC5 107 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 STAP1Q9ULZ2 295 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 RNF24Q9Y225 148 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 COL6A6A6NMZ7 2263 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 DOPEY2Q9Y3R5 2298 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 MYH10P35580 1976 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 UTP20O75691 2785 aaKnown RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 IGHV1OR21-1A0A087WYE8 117 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 OOEPA6NGQ2 149 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SDR42E2A6NKP2 422 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 OR52A4PA6NMU1 304 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CACNB4O00305 520 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CCSO14618 274 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CHUKO15111 745 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 NVLO15381 856 aaKnown RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 KDELR3O43731 214 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 KIAA0754O94854 1291 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 GLCEO94923 617 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SMC2O95347 1197 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SOD1P00441 154 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 F10P00742 488 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 NUDT17P0C025 328 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SLC2A3P11169 496 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CCNB1P14635 433 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 TCN2P20062 427 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 PBLDP30039 288 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SDC4P31431 198 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CASP14P31944 242 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CA5AP35218 305 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 KIAA1024LP59773 190 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 TPI1P60174 286 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 LRRC63Q05C16 580 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SLC10A7Q0GE19 358 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 IHHQ14623 411 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 EXOC3L4Q17RC7 722 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 KCTD19Q17RG1 926 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 DEFB110Q30KQ9 67 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SLC25A52Q3SY17 297 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 TMEM52BQ4KMG9 183 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 IRGCQ6NXR0 463 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 ALKBH5Q6P6C2 394 aaKnown RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 GBP6Q6ZN66 633 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 MSANTD1Q6ZTZ1 278 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 NCCRP1Q6ZVX7 275 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SETD3Q86TU7 594 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 CEND1Q8N111 149 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 ZNF557Q8N988 423 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 RELL2Q8NC24 303 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 DENND6BQ8NEG7 585 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 LPCAT1Q8NF37 534 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 OR7G3Q8NG95 312 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 UBLCP1Q8WVY7 318 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SHC3Q92529 594 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SNX21Q969T3 373 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 PANX3Q96QZ0 392 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 OR2M4Q96R27 311 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SSX3Q99909 188 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 SNRNP25Q9BV90 132 aaKnown RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 RIOK2Q9BVS4 552 aaKnown RBP2.2□□□□□ -2.06
SCFD1-219ENST00000556413 ULBP3Q9BZM4 244 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 GANQ9H2C0 597 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 IKZF5Q9H5V7 419 aa2.2□□□□□ -2.06
SCFD1-219ENST00000556413 DHX35Q9H5Z1 703 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 265 ms