RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 AAED1Q7RTV5 226 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 ABHD12BQ7Z5M8 362 aaPredicted RBP14.22□□□□□ -0.13
DDX55-212ENST00000544738 DEPDC4Q8N2C3 294 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 TMEM99Q8N816 258 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 POMGNT2Q8NAT1 580 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 OR9K2Q8NGE7 335 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 OR52E4Q8NGH9 312 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 BARX1Q9HBU1 254 aaPredicted RBP14.22□□□□□ -0.13
DDX55-212ENST00000544738 SLC7A10Q9NS82 523 aa14.22□□□□□ -0.13
DDX55-212ENST00000544738 CADP27708 2225 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 TGP01266 2768 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 ITGA5P08648 1049 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 PRG2P13727 222 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 ETS2P15036 469 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 ZNF83P51522 516 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 BNIP2Q12982 314 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 LRIF1Q5T3J3 769 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 TSPO2Q5TGU0 170 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 C1orf140Q5VVS0 124 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 AGAP6Q5VW22 663 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 CYB5R2Q6BCY4 276 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 SLC22A25Q6T423 547 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 DTX2Q86UW9 622 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
DDX55-212ENST00000544738 STK35Q8TDR2 534 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 DYDC1Q8WWB3 177 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 C3orf49Q96BT1 292 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 TRAF4Q9BUZ4 470 aaPredicted RBP14.21□□□□□ -0.13
DDX55-212ENST00000544738 SLCO1B3Q9NPD5 702 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 ADPRHL2Q9NX46 363 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 POU2F3Q9UKI9 436 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 AMDHD2Q9Y303 409 aa14.21□□□□□ -0.13
DDX55-212ENST00000544738 OR6C65A6NJZ3 312 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 FRS3O43559 492 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 LMX1BO60663 402 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 NUDT7P0C024 238 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 HOXB9P17482 250 aaPredicted RBP14.2□□□□□ -0.14
DDX55-212ENST00000544738 CD40P25942 277 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 MPGP29372 298 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 AQP5P55064 265 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 FOXG1P55316 489 aaPredicted RBP14.2□□□□□ -0.14
DDX55-212ENST00000544738 VLDLRP98155 873 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 SERPINA11Q86U17 422 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 GPAT4Q86UL3 456 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 KRT73Q86Y46 540 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 FUNDC1Q8IVP5 155 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 ZIC4Q8N9L1 334 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 MAL2Q969L2 176 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 SPDL1Q96EA4 605 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 EBF4Q9BQW3 602 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 SPATA5L1Q9BVQ7 753 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 SLC17A5Q9NRA2 495 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 CCDC167Q9P0B6 97 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 RPS6KB2Q9UBS0 482 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 CORO2BQ9UQ03 480 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 RASD1Q9Y272 281 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 CHST2Q9Y4C5 530 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 GMEB1Q9Y692 573 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 MGAM2Q2M2H8 2515 aa14.2□□□□□ -0.14
DDX55-212ENST00000544738 A0A1W2PR80 420 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 TMEM229AB2RXF0 380 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 M0R1B8 84 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 NPIPB7O75200 414 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 KRT33AO76009 404 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 AHSA1O95433 338 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 WNT11O96014 354 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 CD8AP01732 235 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 PRKAR1BP31321 381 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 ATP4BP51164 291 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 NUDT6P53370 316 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 PRPS1P60891 318 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 NRF1Q16656 503 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 C9orf135Q5VTT2 229 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 REEP3Q6NUK4 255 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 C5orf46Q6UWT4 87 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 WDR31Q8NA23 367 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 MFSD8Q8NHS3 518 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 BOD1Q96IK1 185 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 ZNF385AQ96PM9 386 aaKnown RBP14.19□□□□□ -0.14
DDX55-212ENST00000544738 DHRS9Q9BPW9 319 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 RABEP2Q9H5N1 569 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 FKRPQ9H9S5 495 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 C12orf10Q9HB07 376 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 SLC25A37Q9NYZ2 338 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 TENM1Q9UKZ4 2725 aa14.19□□□□□ -0.14
DDX55-212ENST00000544738 A0A096LNT2 108 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 ELOA3DA6NLF2 546 aaPredicted RBP14.18□□□□□ -0.14
DDX55-212ENST00000544738 EVPLLA8MZ36 301 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 NR5A2O00482 541 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 OR2T1O43869 369 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 ARAFP10398 606 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 ZNF16P17020 682 aaPredicted RBP14.18□□□□□ -0.14
DDX55-212ENST00000544738 PTNP21246 168 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 PAX7P23759 505 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 GTF2E2P29084 291 aaKnown RBP14.18□□□□□ -0.14
DDX55-212ENST00000544738 TTKP33981 857 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 P2RY4P51582 365 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 CDK6Q00534 326 aa14.18□□□□□ -0.14
DDX55-212ENST00000544738 LOXL1Q08397 574 aaPredicted RBP14.18□□□□□ -0.14
DDX55-212ENST00000544738 ELOA3BQ3SY89 546 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms