RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 SLC46A3Q7Z3Q1 461 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 FBXL14Q8N1E6 418 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 TMEM102Q8N9M5 508 aaPredicted RBP7.27□□□□□ -1.25
VPS13D-211ENST00000543710 APIPQ96GX9 242 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 UBQLN4Q9NRR5 601 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 BAZ2AQ9UIF9 1905 aaKnown RBP7.27□□□□□ -1.25
VPS13D-211ENST00000543710 IGLV3-10A0A075B6K4 115 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 FAM72CH0Y354 149 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 CPEP16870 476 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 TAS2R30P59541 319 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 CTXN1P60606 82 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 LTBQ06643 244 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 STK11Q15831 433 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 FAM72AQ5TYM5 149 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 DESI1Q6ICB0 168 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 FAM72DQ6L9T8 149 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 UQCC3Q6UW78 93 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 FAM72BQ86X60 149 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 RNF141Q8WVD5 230 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 MIB2Q96AX9 1013 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 NSUN5Q96P11 429 aaKnown RBP7.27□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF442Q9H7R0 627 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 SLC17A5Q9NRA2 495 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 PARPBPQ9NWS1 579 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 ZMAT5Q9UDW3 170 aaKnown RBP7.27□□□□□ -1.25
VPS13D-211ENST00000543710 CD300AQ9UGN4 299 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 PLAGL1Q9UM63 463 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 RBBP6Q7Z6E9 1792 aaKnown RBP7.27□□□□□ -1.25
VPS13D-211ENST00000543710 COL24A1Q17RW2 1714 aa7.27□□□□□ -1.25
VPS13D-211ENST00000543710 OR6C65A6NJZ3 312 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ATP6V1G2-DDX39BF2Z307 99 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 KLK8O60259 260 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 GLCEO94923 617 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 FTH1P19P0C7X4 201 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ADORA3P0DMS8 318 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 POU3F2P20265 443 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ACHEP22303 614 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SSTP61278 116 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 TAGLNQ01995 201 aaKnown RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 DHODHQ02127 395 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SLC35G1Q2M3R5 365 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SLC51BQ86UW2 128 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 KCT2Q8NC54 265 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 NRG4Q8WWG1 115 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 UBXN10Q96LJ8 280 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SAMD8Q96LT4 415 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF681Q96N22 645 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ZBTB20Q9HC78 741 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 C1GALT1Q9NS00 363 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 LHX3Q9UBR4 397 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 WNK3Q9BYP7 1800 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 C20orf202A1L168 122 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SH2D7A6NKC9 451 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SSX4O60224 188 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 MRPL3P09001 348 aaKnown RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 CD1EP15812 388 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 AKR1C4P17516 323 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 TEAD1P28347 426 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 HLA-FP30511 346 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 P2RY2P41231 377 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 HBG1P69891 147 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 HBG2P69892 147 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 EMX1Q04741 257 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SNTB1Q13884 538 aaKnown RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SGCAQ16586 387 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 C4orf17Q53FE4 359 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SAXO2Q658L1 398 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 LINC00696Q6ZRV3 163 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 MKXQ8IYA7 352 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 FAM185AQ8N0U4 392 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 COMMD1Q8N668 190 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF485Q8NCK3 441 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 RSC1A1Q92681 617 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF160Q9HCG1 818 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 NECAP2Q9NVZ3 263 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 A0A1W2PS29 197 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 OR2A25A4D2G3 310 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 OR8U9P0C7N5 309 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ZNF888P0CJ79 500 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 HTD2P86397 168 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ACVR1Q04771 509 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 OR1Q1Q15612 314 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 USF2Q15853 346 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 LETMD1Q6P1Q0 360 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 BRICD5Q6PL45 260 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SULF2Q8IWU5 870 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 POGLUT1Q8NBL1 392 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 OR4K1Q8NGD4 311 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 OR5D16Q8NGK9 328 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 DHRS1Q96LJ7 313 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 SLC22A12Q96S37 553 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ACPTQ9BZG2 426 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 DPH1Q9BZG8 443 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 NMNAT2Q9BZQ4 307 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ZCCHC4Q9H5U6 513 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 TMEM100Q9NV29 134 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 CORINQ9Y5Q5 1042 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 NPFFR2Q9Y5X5 522 aa7.26□□□□□ -1.25
VPS13D-211ENST00000543710 ATXN1LP0C7T5 689 aaKnown RBP7.26□□□□□ -1.25
VPS13D-211ENST00000543710 GM2AP17900 193 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms