RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RPS11P62280 158 aaKnown RBP eCLIP16.33■□□□□ 0.2
GNE-204ENST00000539208 EBPQ15125 230 aaKnown RBP16.33■□□□□ 0.2
GNE-204ENST00000539208 EMC4Q5J8M3 183 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 ATAD3CQ5T2N8 411 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 UNQ9370/PRO34162Q6UXP9 181 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 PRSS42Q7Z5A4 293 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 EXD3Q8N9H8 876 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 ST6GAL2Q96JF0 529 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 Q96M85 177 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 NEK6Q9HC98 313 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 GNG8Q9UK08 70 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 COPS3Q9UNS2 423 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 EYSQ5T1H1 3165 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 ANKRD61A6NGH8 418 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 SELENOFO60613 162 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 ICOSLGO75144 302 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 FOLR1P15328 257 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 HLA-DMAP28067 261 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 LTBQ06643 244 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 ALG10Q5BKT4 473 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 LEG1Q6P5S2 330 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 PLET1Q6UQ28 207 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 JAZF1Q86VZ6 243 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 C10orf53Q8N6V4 93 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 SAMD12Q8N8I0 201 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 ALG12Q9BV10 488 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 NDEL1Q9GZM8 345 aa16.33■□□□□ 0.2
GNE-204ENST00000539208 A0A0G2JMP0 313 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 TRBV2A0A0J9YWF9 115 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 A0A0X1KG70 313 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 NOTOA8MTQ0 251 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 MAGEB4O15481 346 aaPredicted RBP16.32■□□□□ 0.2
GNE-204ENST00000539208 EIF4E2O60573 245 aaKnown RBP16.32■□□□□ 0.2
GNE-204ENST00000539208 TSPAN2O60636 221 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 EIF4EP06730 217 aaKnown RBP16.32■□□□□ 0.2
GNE-204ENST00000539208 PITPNBP48739 271 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 AFF3P51826 1226 aaKnown RBP16.32■□□□□ 0.2
GNE-204ENST00000539208 EFNA3P52797 238 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 ZNF684Q5T5D7 378 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 WDR74Q6RFH5 385 aaPredicted RBP16.32■□□□□ 0.2
GNE-204ENST00000539208 OVCH1Q7RTY7 1134 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 C9orf40Q8IXQ3 194 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 SLC35F3Q8IY50 421 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 SLC25A45Q8N413 288 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 OR4M2Q8NGB6 313 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 OR4M1Q8NGD0 313 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 OR13C5Q8NGS8 318 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 OR6K6Q8NGW6 343 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 ZNF563Q8TA94 476 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 ZNF524Q96C55 264 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 ZNF486Q96H40 463 aaPredicted RBP16.32■□□□□ 0.2
GNE-204ENST00000539208 WDR70Q9NW82 654 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 CEP192Q8TEP8 1941 aa16.32■□□□□ 0.2
GNE-204ENST00000539208 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 TACR3P29371 465 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 IL12BP29460 328 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 CSF2RBP32927 897 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 INPP1P49441 399 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 CTXN1P60606 82 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 ZNF117Q03924 483 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 NSDHLQ15738 373 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 SLC25A35Q3KQZ1 300 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 HLA-DQA1Q5Y7H0 255 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 KCTD20Q7Z5Y7 419 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 TRMT10AQ8TBZ6 339 aaKnown RBP16.31■□□□□ 0.2
GNE-204ENST00000539208 GAL3ST4Q96RP7 486 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 LPAR4Q99677 370 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 TTTY10Q9BZA0 68 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 FKRPQ9H9S5 495 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 ACOXLQ9NUZ1 547 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 ABRACLQ9P1F3 81 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 A0A1B0GX78 115 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 OR6C76A6NM76 312 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 ALG1L2C9J202 215 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 BCAT2O15382 392 aaPredicted RBP16.31■□□□□ 0.2
GNE-204ENST00000539208 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 BCKDHBP21953 392 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 EDNRAP25101 427 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 ZP2Q05996 745 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 VWA2Q5GFL6 755 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 CEP78Q5JTW2 689 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 PRAMEF17Q5VTA0 474 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 SLC16A9Q7RTY1 509 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 UBE2J2Q8N2K1 259 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 OR1N1Q8NGS0 311 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 SLC7A6Q92536 515 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 TP53INP1Q96A56 240 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 KTI12Q96EK9 354 aaPredicted RBP16.31■□□□□ 0.2
GNE-204ENST00000539208 WWTR1Q9GZV5 400 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 RXFP3Q9NSD7 469 aa16.31■□□□□ 0.2
GNE-204ENST00000539208 A0A0B4J293 547 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 FLRT2O43155 660 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 GIMD1P0DJR0 217 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 NR4A2P43354 598 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 PNLIPRP2P54317 469 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 SNAP47Q5SQN1 464 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 HACD4Q5VWC8 232 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 SLC6A19Q695T7 634 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 IL20RBQ6UXL0 311 aa16.3■□□□□ 0.2
GNE-204ENST00000539208 PRR22Q8IZ63 422 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms