RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PRSS50Q9UI38 385 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 RASD1Q9Y272 281 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 FBN2P35556 2912 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 M0R082 166 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 GRPRP30550 384 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 SSTR2P30874 369 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 MSX2P35548 267 aaPredicted RBP20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 TMEM225Q6GV28 225 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 ZNF417Q8TAU3 575 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 MOGAT1Q96PD6 335 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 ZNF587Q96SQ5 575 aaPredicted RBP20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 KLHL4Q9C0H6 718 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 DCAF13Q9NV06 445 aaKnown RBP20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 RPS6KA6Q9UK32 745 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 A4GNTQ9UNA3 340 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 SNX13Q9Y5W8 968 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 ITPR2Q14571 2701 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 ABCA12Q86UK0 2595 aa20.13■□□□□ 0.81
SFSWAP-204ENST00000535399 MPDZO75970 2070 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 SH3D21A4FU49 640 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 VAMP5O95183 116 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 IFNW1P05000 195 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 EPXP11678 715 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 CBLP22681 906 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 GTF2E2P29084 291 aaKnown RBP20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 MFSD13AQ14CX5 517 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 TTC33Q6PID6 262 aaPredicted RBP20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 FKBP9P1Q75LS8 142 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 GPAT4Q86UL3 456 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 NKAIN4Q8IVV8 208 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 ZNF100Q8IYN0 542 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 TMEM45BQ96B21 275 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 PRRC1Q96M27 445 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 DACH2Q96NX9 599 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 SLC19A3Q9BZV2 496 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 MAGEL2Q9UJ55 1249 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 B3GALT5Q9Y2C3 310 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 TESMINQ9Y4I5 508 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 CORINQ9Y5Q5 1042 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 DCHS2Q6V1P9 2916 aa20.12■□□□□ 0.81
SFSWAP-204ENST00000535399 LRRN3E7EW58 273 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 MRPL33O75394 65 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 GMNNO75496 209 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 UBOX5O94941 541 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 THRBP10828 461 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 PSMB1P20618 241 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 TLE4Q04727 773 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 POU4F3Q15319 338 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 Q6ZT83 130 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 H1FNTQ75WM6 255 aaPredicted RBP20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 TSEN54Q7Z6J9 526 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 EPHX4Q8IUS5 362 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 KDM8Q8N371 416 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 ADPRHL1Q8NDY3 354 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 APH1AQ96BI3 265 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 WFIKKN1Q96NZ8 548 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 ZNF385AQ96PM9 386 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 FANCFQ9NPI8 374 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 C6orf203Q9P0P8 240 aaPredicted RBP20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 B3GAT1Q9P2W7 334 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 GPR52Q9Y2T5 361 aa20.11■□□□□ 0.81
SFSWAP-204ENST00000535399 CACNA1DQ01668 2161 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 J3KTA2 159 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 FFAR1O14842 300 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 ARPC2O15144 300 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 ADAP00813 363 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 FUT4P22083 530 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 YAP1P46937 504 aaKnown RBP20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 DAZAP2Q15038 168 aaPredicted RBP20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 ZNF74Q16587 644 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 CASP12Q6UXS9 341 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 C22orf34Q6ZV56 151 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 CREB3L2Q70SY1 520 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 CXorf67Q86X51 503 aaPredicted RBP20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 ARHGAP24Q8N264 748 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 C10orf53Q8N6V4 93 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 FAM86B1Q8N7N1 296 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 SCAIQ8N9R8 606 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 TMEM255BQ8WV15 326 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 C1orf21Q9H246 121 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 MEPEQ9NQ76 525 aaPredicted RBP20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 MRPL39Q9NYK5 338 aaKnown RBP20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 TAS2R1Q9NYW7 299 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 NDRG3Q9UGV2 375 aa20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 SAMD4AQ9UPU9 718 aaKnown RBP20.1■□□□□ 0.81
SFSWAP-204ENST00000535399 LOC102725191A0A1B0GVB3 256 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 KPNA4O00629 521 aaPredicted RBP20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 PRSS23O95084 383 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 CNOT4O95628 575 aaKnown RBP20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 MT-ATP6P00846 226 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 RBM34P42696 430 aaKnown RBP20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 UGT2B15P54855 530 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 ST3GAL3Q11203 375 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 P2RY6Q15077 328 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 ANKRD34AQ69YU3 496 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 OFCC1Q8IZS5 231 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 OXGR1Q96P68 337 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 ASPNQ9BXN1 380 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 MCCC2Q9HCC0 563 aa20.09■□□□□ 0.81
SFSWAP-204ENST00000535399 PARPBPQ9NWS1 579 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms