RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CTBP2P56545 445 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 MAMDC2Q7Z304 686 aaPredicted RBP12.26□□□□□ -0.45
CD44-224ENST00000526669 NANOGNBQ7Z5D8 188 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 ZER1Q7Z7L7 766 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 ADGRE4PQ86SQ3 457 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 ATCAYQ86WG3 371 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 CDK20Q8IZL9 346 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 RNF113BQ8IZP6 322 aaKnown RBP12.26□□□□□ -0.45
CD44-224ENST00000526669 PQLC1Q8N2U9 271 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 KDM8Q8N371 416 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 C9orf106Q8NAJ2 232 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 AQP11Q8NBQ7 271 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 OR13C2Q8NGS9 318 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 PRR7Q8TB68 274 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 GTPBP3Q969Y2 492 aaKnown RBP12.26□□□□□ -0.45
CD44-224ENST00000526669 CENPNQ96H22 339 aaPredicted RBP12.26□□□□□ -0.45
CD44-224ENST00000526669 GPA33Q99795 319 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 NAA11Q9BSU3 229 aaPredicted RBP12.26□□□□□ -0.45
CD44-224ENST00000526669 ASPNQ9BXN1 380 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 FKRPQ9H9S5 495 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 CHST11Q9NPF2 352 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 TRAPPC4Q9Y296 219 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 TMEM5Q9Y2B1 443 aa12.26□□□□□ -0.45
CD44-224ENST00000526669 C11orf98E9PRG8 122 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 PDLIM1O00151 329 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 SERPINI2O75830 405 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 GASTP01350 101 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 ANPEPP15144 967 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 CA7P43166 264 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 CASP6P55212 293 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 PMS2P3Q13401 168 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 SHQ1Q6PI26 577 aaKnown RBP12.25□□□□□ -0.45
CD44-224ENST00000526669 B3GNT6Q6ZMB0 384 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 SEM1Q6ZVN7 128 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 STK32CQ86UX6 486 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 FJX1Q86VR8 437 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 EPHX4Q8IUS5 362 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 GCNT2Q8N0V5 402 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 OR5J2Q8NH18 312 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 OR51A7Q8NH64 312 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 GNPDA2Q8TDQ7 276 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 ABHD3Q8WU67 409 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 ZNF775Q96BV0 537 aaPredicted RBP12.25□□□□□ -0.45
CD44-224ENST00000526669 KRCC1Q9NPI7 259 aaPredicted RBP12.25□□□□□ -0.45
CD44-224ENST00000526669 PAQR5Q9NXK6 330 aaPredicted RBP12.25□□□□□ -0.45
CD44-224ENST00000526669 ZNF229Q9UJW7 825 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 OAZ3Q9UMX2 235 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 HCFC1P51610 2035 aa12.25□□□□□ -0.45
CD44-224ENST00000526669 UNC119BA6NIH7 251 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 AQP7P3A6NL99 342 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 BLOC1S5-TXNDC5H3BN57 136 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 CCL21O00585 134 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 EIF1BO60739 113 aaKnown RBP12.24□□□□□ -0.45
CD44-224ENST00000526669 HPRP00739 348 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 MT-ATP6P00846 226 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 HIST1H2ABP04908 130 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 ASAH2BP0C7U1 165 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 ADORA3P0DMS8 318 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 AQP2P41181 271 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 P2RY4P51582 365 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 AGFG1P52594 562 aaKnown RBP12.24□□□□□ -0.45
CD44-224ENST00000526669 RASGEF1BQ0VAM2 473 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 MFSD13AQ14CX5 517 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 NSUN5P2Q63ZY6 315 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 ABLIM2Q6H8Q1 611 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 ZNF770Q6IQ21 691 aaPredicted RBP12.24□□□□□ -0.45
CD44-224ENST00000526669 C1orf94Q6P1W5 598 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 PAQR6Q6TCH4 344 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 H1FNTQ75WM6 255 aaPredicted RBP12.24□□□□□ -0.45
CD44-224ENST00000526669 HIST3H2AQ7L7L0 130 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 GPAT4Q86UL3 456 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 MYO18BQ8IUG5 2567 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 MCEMP1Q8IX19 187 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 MARVELD2Q8N4S9 558 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 OR6S1Q8NH40 331 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 MOSPD2Q8NHP6 518 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 HIST1H2ACQ93077 130 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 FEVQ99581 238 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 NIPSNAP1Q9BPW8 284 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 CALHM2Q9HA72 323 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 SMURF2Q9HAU4 748 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 MRPL39Q9NYK5 338 aaKnown RBP12.24□□□□□ -0.45
CD44-224ENST00000526669 KIF17Q9P2E2 1029 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 NKX1-2Q9UD57 310 aaPredicted RBP12.24□□□□□ -0.45
CD44-224ENST00000526669 ZNF175Q9Y473 711 aa12.24□□□□□ -0.45
CD44-224ENST00000526669 CD8B2A6NJW9 211 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 G3V2T6 193 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 MS4A18H0YCH9 400 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 PLPP3O14495 311 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 KLF4O43474 513 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 DNPH1O43598 174 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 CYTIPO60759 359 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 FZD7O75084 574 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 OR6A2O95222 327 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 PLGP00747 810 aaPredicted RBP12.23□□□□□ -0.45
CD44-224ENST00000526669 IGF2P01344 180 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 STSP08842 583 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 GLI4P10075 376 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
CD44-224ENST00000526669 AHCYP23526 432 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms