RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 MED20Q9H944 212 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 SIRT3Q9NTG7 399 aaPredicted RBP9.12□□□□□ -0.95
USP35-201ENST00000526425 PSORS1C1Q9UIG5 152 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 MN1Q10571 1320 aaPredicted RBP9.12□□□□□ -0.95
USP35-201ENST00000526425 A0A1B0GWJ7 208 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 DBX1A6NMT0 343 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 A8MVJ9 347 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 SMAD9O15198 467 aaKnown RBP9.12□□□□□ -0.95
USP35-201ENST00000526425 SLC31A2O15432 143 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 CLN5O75503 358 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 REM1O75628 298 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 ADAP00813 363 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 CLUP10909 449 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
USP35-201ENST00000526425 CELP19835 753 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 HLA-DMAP28067 261 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 ENPP2Q13822 863 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 KRBOX4Q5JUW0 171 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 FAHD1Q6P587 224 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 RANBP3LQ86VV4 465 aaPredicted RBP9.12□□□□□ -0.95
USP35-201ENST00000526425 FAM98AQ8NCA5 519 aaKnown RBP9.12□□□□□ -0.95
USP35-201ENST00000526425 TMEM185AQ8NFB2 350 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 OR52E4Q8NGH9 312 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 OR5M3Q8NGP4 307 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 DDOQ99489 341 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 GINS4Q9BRT9 223 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 OR8D2Q9GZM6 311 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 DUSP21Q9H596 190 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 TMEM27Q9HBJ8 222 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 LHX9Q9NQ69 397 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 PRDM7Q9NQW5 492 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 ACSS1Q9NUB1 689 aaPredicted RBP9.12□□□□□ -0.95
USP35-201ENST00000526425 CALML5Q9NZT1 146 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 NDRG3Q9UGV2 375 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 SLC17A4Q9Y2C5 497 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 DTX4Q9Y2E6 619 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 SLC6A5Q9Y345 797 aa9.12□□□□□ -0.95
USP35-201ENST00000526425 A0A0C4DFX4 3053 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 A0A1W2PPK0 400 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 PRAMEF26H0Y7S4 382 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 FFAR1O14842 300 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 FARS2O95363 451 aaKnown RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 GYPBP06028 91 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 CPMP14384 443 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 RORAP35398 523 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 GCGRP47871 477 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 Q7L0L9 218 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 SERPINA12Q8IW75 414 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 ZNF383Q8NA42 475 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 MFSD9Q8NBP5 474 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 DENND6BQ8NEG7 585 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 FCGR1BQ92637 280 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 SLAMF9Q96A28 289 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 RNFT2Q96EX2 444 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 LYARQ9NX58 379 aaKnown RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 GPR55Q9Y2T6 319 aaPredicted RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 AP1M2Q9Y6Q5 423 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 MDC1Q14676 2089 aaKnown RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 TMEM265A0A087WTH1 108 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 PRKYO43930 277 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 TGM6O95932 706 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 PRF1P14222 555 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 NME1P15531 152 aaKnown RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 ANXA7P20073 488 aaKnown RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 RABIFP47224 123 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 PSMD4P55036 377 aaKnown RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 OR2B8PP59922 312 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 RUNX2Q13950 521 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 KLHL22Q53GT1 634 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 ENTPD8Q5MY95 495 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 LIPNQ5VXI9 398 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 NKAIN2Q5VXU1 208 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 ACSM5Q6NUN0 579 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 VHLLQ6RSH7 139 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 OR8J1Q8NGP2 316 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 CREB3L4Q8TEY5 395 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 BSCL2Q96G97 398 aaPredicted RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 TREM1Q9NP99 234 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 KRCC1Q9NPI7 259 aaPredicted RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 PURGQ9UJV8 347 aaKnown RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 PEX12O00623 359 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 PLA2G10O15496 165 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 MPZL2O60487 215 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 ZNF217O75362 1048 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 PEBP1P30086 187 aaKnown RBP9.11□□□□□ -0.95
USP35-201ENST00000526425 AHRP35869 848 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 GIPRP48546 466 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 BLOC1S1P78537 153 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 DUSP5Q16690 384 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 GXYLT1Q4G148 440 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 C1orf189Q5VU69 101 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 RHOUQ7L0Q8 258 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 SLC29A4Q7RTT9 530 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 PRICKLE2Q7Z3G6 844 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 CAMKMTQ7Z624 323 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 OR4F15Q8NGB8 312 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 TMEM255BQ8WV15 326 aa9.11□□□□□ -0.95
USP35-201ENST00000526425 WDR34Q96EX3 536 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms