RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 AQP7P3A6NL99 342 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 HNRNPCL2B2RXH8 293 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 HNRNPCL3B7ZW38 293 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 FTCDNL1E5RQL4 147 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 SSX4O60224 188 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 TPST2O60704 377 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 HNRNPCL1O60812 293 aaKnown RBP9.55□□□□□ -0.88
RNF4-212ENST00000509258 CSF3P09919 207 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 FAM157CP0CG43 387 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 HNRNPCL4P0DMR1 293 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 ARAFP10398 606 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 PAX7P23759 505 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 SELENOPP49908 381 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 CHRNB3Q05901 458 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 SELPLGQ14242 412 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 RAB35Q15286 201 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 ADRM1Q16186 407 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 C6orf52Q5T4I8 152 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 WBP2NLQ6ICG8 309 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 ZNF544Q6NX49 715 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 KLHL24Q6TFL4 600 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 ABHD12BQ7Z5M8 362 aaPredicted RBP9.55□□□□□ -0.88
RNF4-212ENST00000509258 EPHX4Q8IUS5 362 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 KDM8Q8N371 416 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 MUC15Q8N387 334 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 C17orf78Q8N4C9 275 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 LRRC8CQ8TDW0 803 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 DDIT4LQ96D03 193 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 SPDL1Q96EA4 605 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 MUS81Q96NY9 551 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 DHRS9Q9BPW9 319 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 CACNG6Q9BXT2 260 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 ZNF385DQ9H6B1 395 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 RMND5AQ9H871 391 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 FKRPQ9H9S5 495 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 BCL2L10Q9HD36 194 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 ADPRHL2Q9NX46 363 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 CCDC167Q9P0B6 97 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 CDC42EP3Q9UKI2 254 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 PRDM4Q9UKN5 801 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 B3GALT5Q9Y2C3 310 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 SLC9A8Q9Y2E8 581 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 AMDHD2Q9Y303 409 aa9.55□□□□□ -0.88
RNF4-212ENST00000509258 POLR3GO15318 223 aaPredicted RBP9.54□□□□□ -0.88
RNF4-212ENST00000509258 SASH3O75995 380 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 SLC25A16P16260 332 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 CXCR1P25024 350 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 CD40P25942 277 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 TTKP33981 857 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 FABP6P51161 128 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 IRX1P78414 480 aaPredicted RBP9.54□□□□□ -0.88
RNF4-212ENST00000509258 TMEM249Q2WGJ8 235 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 HIKESHIQ53FT3 197 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 AGKQ53H12 422 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 ZNF311Q5JNZ3 666 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 C1orf140Q5VVS0 124 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 C11orf71Q6IPW1 123 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 DLEU7Q6UYE1 221 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 RETREG3Q86VR2 466 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 ZNF440Q8IYI8 595 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 C1orf162Q8NEQ5 155 aaPredicted RBP9.54□□□□□ -0.88
RNF4-212ENST00000509258 HTRA1Q92743 480 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 TMEM45BQ96B21 275 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 KTI12Q96EK9 354 aaPredicted RBP9.54□□□□□ -0.88
RNF4-212ENST00000509258 CPPED1Q9BRF8 314 aaPredicted RBP9.54□□□□□ -0.88
RNF4-212ENST00000509258 CCDC28BQ9BUN5 200 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 NELFAQ9H3P2 528 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 SEC61A2Q9H9S3 476 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 CACYBPQ9HB71 228 aaKnown RBP9.54□□□□□ -0.88
RNF4-212ENST00000509258 SLC17A5Q9NRA2 495 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 CALML5Q9NZT1 146 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 B3GAT1Q9P2W7 334 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 PMF1-BGLAPU3KQ54 211 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 NBEAL1Q6ZS30 2694 aa9.54□□□□□ -0.88
RNF4-212ENST00000509258 A0A096LNT2 108 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 A8MVM7 634 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 M0R1B8 84 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 PHF1O43189 567 aaPredicted RBP9.53□□□□□ -0.88
RNF4-212ENST00000509258 FZD7O75084 574 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 UPK3AO75631 287 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 TGDSO95455 350 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 LGI1O95970 557 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 WNT11O96014 354 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 GPIP06744 558 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 PNMTP11086 282 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 AQP1P29972 269 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 RPS5P46782 204 aaKnown RBP9.53□□□□□ -0.88
RNF4-212ENST00000509258 TUBA1BP68363 451 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 TUBA4AP68366 448 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 VLDLRP98155 873 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 LOXL1Q08397 574 aaPredicted RBP9.53□□□□□ -0.88
RNF4-212ENST00000509258 FADDQ13158 208 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 LARS2Q15031 903 aaKnown RBP9.53□□□□□ -0.88
RNF4-212ENST00000509258 GCNT6Q5T4J0 391 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 CREB3L2Q70SY1 520 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 TUBA1AQ71U36 451 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 GPAT4Q86UL3 456 aa9.53□□□□□ -0.88
RNF4-212ENST00000509258 MYPOPQ86VE0 399 aaPredicted RBP9.53□□□□□ -0.88
RNF4-212ENST00000509258 TSPYL5Q86VY4 417 aaPredicted RBP9.53□□□□□ -0.88
RNF4-212ENST00000509258 PTOV1Q86YD1 416 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms