RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 HIKESHIQ53FT3 197 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 BEX5Q5H9J7 111 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 AGBL2Q5U5Z8 902 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 LEMD1Q68G75 181 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 C22orf42Q6IC83 251 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 C16orf87Q6PH81 154 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 ZNF600Q6ZNG1 722 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 VTCN1Q7Z7D3 282 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 PLA2G4DQ86XP0 818 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 MMAAQ8IVH4 418 aaKnown RBP3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 CADM2Q8N3J6 435 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR8K3Q8NH51 312 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR56B4Q8NH76 319 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 PYROXD1Q8WU10 500 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 ITLN1Q8WWA0 313 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 PIBF1Q8WXW3 757 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 OXGR1Q96P68 337 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR5M11Q96RB7 305 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 MCCC1Q96RQ3 725 aaPredicted RBP3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 TBX15Q96SF7 602 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 TEKT3Q9BXF9 490 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 SRXN1Q9BYN0 137 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 CHIAQ9BZP6 476 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 RACGAP1Q9H0H5 632 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 ADNPQ9H2P0 1102 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 CYP3A43Q9HB55 503 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 CCNB1IP1Q9NPC3 277 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 GPATCH2LQ9NWQ4 482 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 HOXC10Q9NYD6 342 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 SNED1Q8TER0 1413 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 SH3TC1Q8TE82 1336 aa3.06□□□□□ -1.92
TRAPPC13-208ENST00000505553 TUBAL3A6NHL2 446 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 EPM2AB3EWF7 344 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 LOC110117498-PIK3R3F6TDL0 507 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 M0QX08 132 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 ZNF701M0R085 212 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 DCTN6O00399 190 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 FLOT1O75955 427 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 IGKV3-20P01619 116 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 PIGRP01833 764 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 CCDC172P0C7W6 258 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 UBTFL1P0CB47 393 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 HTR1FP30939 366 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 NAA10P41227 235 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 CX3CR1P49238 355 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 GPM6AP51674 278 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 ERVPABLB-1P60509 514 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 IRX1P78414 480 aaPredicted RBP3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 PAX8Q06710 450 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 XKR4Q5GH76 650 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 CERS6Q6ZMG9 384 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 ACOT7LQ6ZUV0 252 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 NIPA1Q7RTP0 329 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 SLC16A14Q7RTX9 510 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 FTMTQ8N4E7 242 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 FNDC5Q8NAU1 212 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR4K14Q8NGD5 310 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR52I1Q8NGK6 324 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR6T1Q8NGN1 323 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR2A12Q8NGT7 310 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 CCDC26Q8TAB7 109 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 MARCH1Q8TCQ1 289 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 KIFAP3Q92845 792 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 LRRC39Q96DD0 335 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 CCDC126Q96EE4 140 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 PAGE5Q96GU1 130 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 GAL3ST1Q99999 423 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 SIKE1Q9BRV8 207 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 IL22Q9GZX6 179 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 FOLH1BQ9HBA9 442 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 PTTG3PQ9NZH4 202 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR1A1Q9P1Q5 309 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 ARMCX1Q9P291 453 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 STK38LQ9Y2H1 464 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 ERCC6Q03468 1493 aa3.05□□□□□ -1.92
TRAPPC13-208ENST00000505553 A0A0J9YYE9 177 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 GFYI3L273 518 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 NDUFS8O00217 210 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 SIRPB1O00241 398 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 SAP18O00422 153 aaKnown RBP3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 NDUFAB1O14561 156 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 RAB29O14966 203 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 HUS1O60921 280 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 C1orf105O95561 183 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 STAMBPO95630 424 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 TRBC1P01850 177 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 ALDOBP05062 364 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 FGF1P05230 155 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 CRYGCP07315 174 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 RNF224P0DH78 156 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 DPEP1P16444 411 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 SRMP19623 302 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 U2AF2P26368 475 aaKnown RBP eCLIP3.04□□□□□ -1.927e-7■■■■□ 21.2
TRAPPC13-208ENST00000505553 MAGEA9P43362 315 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 MRPL19P49406 292 aaKnown RBP3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 FBXW4P57775 412 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 DAOAP59103 153 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 CD47Q08722 323 aa3.04□□□□□ -1.92
TRAPPC13-208ENST00000505553 PARP15Q460N3 678 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms