RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 ZNF587Q96SQ5 575 aaPredicted RBP12.06□□□□□ -0.48
FDPS-219ENST00000495308 EPYCQ99645 322 aa12.06□□□□□ -0.48
FDPS-219ENST00000495308 SPOCK3Q9BQ16 436 aa12.06□□□□□ -0.48
FDPS-219ENST00000495308 TACO1Q9BSH4 297 aaKnown RBP12.06□□□□□ -0.48
FDPS-219ENST00000495308 POLR2J2Q9GZM3 115 aaKnown RBP12.06□□□□□ -0.48
FDPS-219ENST00000495308 POLR2J3Q9H1A7 115 aaKnown RBP12.06□□□□□ -0.48
FDPS-219ENST00000495308 C1orf21Q9H246 121 aa12.06□□□□□ -0.48
FDPS-219ENST00000495308 EMC3Q9P0I2 261 aa12.06□□□□□ -0.48
FDPS-219ENST00000495308 C6orf203Q9P0P8 240 aaPredicted RBP12.06□□□□□ -0.48
FDPS-219ENST00000495308 FOXD3Q9UJU5 478 aaPredicted RBP12.06□□□□□ -0.48
FDPS-219ENST00000495308 SAMD4AQ9UPU9 718 aaKnown RBP12.06□□□□□ -0.48
FDPS-219ENST00000495308 FLVCR1Q9Y5Y0 555 aa12.06□□□□□ -0.48
FDPS-219ENST00000495308 OR2T1O43869 369 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 POU2F1P14859 743 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 CCKARP32238 428 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 NTF4P34130 210 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 CD79BP40259 229 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 SLC16A1P53985 500 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 UGT2B15P54855 530 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 PDK3Q15120 406 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 SPATS1Q496A3 300 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 TSEN54Q7Z6J9 526 aaKnown RBP12.05□□□□□ -0.48
FDPS-219ENST00000495308 STK32CQ86UX6 486 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 C10orf53Q8N6V4 93 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 OR9K2Q8NGE7 335 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 PFN4Q8NHR9 129 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 SLC7A6OSQ96CW6 309 aaPredicted RBP12.05□□□□□ -0.48
FDPS-219ENST00000495308 MPP4Q96JB8 637 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 ZNF426Q9BUY5 554 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 MEPEQ9NQ76 525 aaPredicted RBP12.05□□□□□ -0.48
FDPS-219ENST00000495308 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 PRPF19Q9UMS4 504 aaKnown RBP12.05□□□□□ -0.48
FDPS-219ENST00000495308 NOSIPQ9Y314 301 aaKnown RBP12.05□□□□□ -0.48
FDPS-219ENST00000495308 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
FDPS-219ENST00000495308 CACNA1DQ01668 2161 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 CYSRT1A8MQ03 144 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 hCG_2039718K7EN88 272 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 FFAR1O14842 300 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 HNRNPRO43390 633 aaKnown RBP12.04□□□□□ -0.48
FDPS-219ENST00000495308 PIP5K1CO60331 668 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 FZD7O75084 574 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 CH25HO95992 272 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 IGHV3-9P01782 118 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 OR3A2P47893 321 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 VLDLRP98155 873 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 SORDQ00796 357 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 IL1RL1Q01638 556 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 TMEM225Q6GV28 225 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 CASP12Q6UXS9 341 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 KIF18BQ86Y91 864 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 ZNF100Q8IYN0 542 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 ARHGAP24Q8N264 748 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 ZIC4Q8N9L1 334 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 LINC01560Q8TB33 94 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 TMEM239Q8WW34 195 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 CCDC124Q96CT7 223 aaKnown RBP12.04□□□□□ -0.48
FDPS-219ENST00000495308 ZNF385AQ96PM9 386 aaKnown RBP12.04□□□□□ -0.48
FDPS-219ENST00000495308 THTPAQ9BU02 230 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 KLHL4Q9C0H6 718 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 MAN2C1Q9NTJ4 1040 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 CRIM1Q9NZV1 1036 aa12.04□□□□□ -0.48
FDPS-219ENST00000495308 ENO4A6NNW6 628 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 GPR171O14626 319 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 GYG2O15488 501 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 MRPL33O75394 65 aaKnown RBP12.03□□□□□ -0.48
FDPS-219ENST00000495308 DIRAS1O95057 198 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 SEMG1P04279 462 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 THRBP10828 461 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 PRF1P14222 555 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 NQO1P15559 274 aaKnown RBP12.03□□□□□ -0.48
FDPS-219ENST00000495308 UGT2B10P36537 528 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 KIR2DL3P43628 341 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.483e-6■□□□□ 8.5
FDPS-219ENST00000495308 MS4A2Q01362 244 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 ST3GAL3Q11203 375 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 TSC22D1Q15714 1073 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 ANKRD34AQ69YU3 496 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 STAC2Q6ZMT1 411 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 BEND4Q6ZU67 534 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 CREB3L2Q70SY1 520 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 H1FNTQ75WM6 255 aaPredicted RBP12.03□□□□□ -0.48
FDPS-219ENST00000495308 CXorf67Q86X51 503 aaPredicted RBP12.03□□□□□ -0.48
FDPS-219ENST00000495308 OFCC1Q8IZS5 231 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 ZNF295-AS1Q8N0V1 137 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 LRRC17Q8N6Y2 441 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 OR6S1Q8NH40 331 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 PYURFQ96I23 114 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 C7orf34Q96L11 122 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 FNDC11Q9BVV2 318 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 SF3B5Q9BWJ5 86 aaKnown RBP12.03□□□□□ -0.48
FDPS-219ENST00000495308 ASPNQ9BXN1 380 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 SLC19A3Q9BZV2 496 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 C20orf141Q9NUB4 165 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 ELOVL5Q9NYP7 299 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 ACTR3BQ9P1U1 418 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 RASD1Q9Y272 281 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 ENPP4Q9Y6X5 453 aa12.03□□□□□ -0.48
FDPS-219ENST00000495308 PDZD2O15018 2839 aa12.02□□□□□ -0.48
FDPS-219ENST00000495308 TUBAL3A6NHL2 446 aa12.02□□□□□ -0.49
FDPS-219ENST00000495308 MS4A18H0YCH9 400 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms