RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 TMEM220Q6QAJ8 160 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 UQCC3Q6UW78 93 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 LRRC74BQ6ZQY2 392 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 NUDCD3Q8IVD9 361 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 MTURNQ8N3F0 131 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 RNF175Q8N4F7 328 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 PQLC3Q8N755 202 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 Q8N7P7 452 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ZNF321PQ8N8H1 164 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ATP6V0D2Q8N8Y2 350 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 SDR9C7Q8NEX9 313 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 CCDC26Q8TAB7 109 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 MRAPQ8TCY5 172 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ACMSDQ8TDX5 336 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 SETD7Q8WTS6 366 aaKnown RBP1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ARNTL2Q8WYA1 636 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 NRGNQ92686 78 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 UFD1Q92890 307 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 PHYHIPLQ96FC7 376 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 SEC22AQ96IW7 307 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 PLEKHA8Q96JA3 519 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ZNF641Q96N77 438 aaPredicted RBP1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ZIM3Q96PE6 472 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 TECTBQ96PL2 329 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 CYP2S1Q96SQ9 504 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 MBOAT4Q96T53 435 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 FMO2Q99518 471 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 RIOK1Q9BRS2 568 aaKnown RBP1.78□□□□□ -2.12
LMNB1-207ENST00000494185 PAXXQ9BUH6 204 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 C20orf24Q9BUV8 137 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 RACGAP1Q9H0H5 632 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 REEP4Q9H6H4 257 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ANKRA2Q9H9E1 313 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 CAB39LQ9H9S4 337 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 HOXC10Q9NYD6 342 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 SPRR3Q9UBC9 169 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 SLC2A6Q9UGQ3 507 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ANGPTL2Q9UKU9 493 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 VANGL2Q9ULK5 521 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 TBC1D24Q9ULP9 559 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 TMCO1Q9UM00 188 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 ZNF256Q9Y2P7 627 aaPredicted RBP1.78□□□□□ -2.12
LMNB1-207ENST00000494185 RPL36Q9Y3U8 105 aaKnown RBP1.78□□□□□ -2.12
LMNB1-207ENST00000494185 FLVCR1Q9Y5Y0 555 aa1.78□□□□□ -2.12
LMNB1-207ENST00000494185 GON4LQ3T8J9 2241 aa1.78□□□□□ -2.13
LMNB1-207ENST00000494185 INSRP06213 1382 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 TCRBV9S1A1TA0A576 114 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 FAM168BA1KXE4 195 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 OR5B21A6NL26 309 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 ZNF705EA8MWA4 302 aaPredicted RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 SUPT3HB4E1H0 165 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 GOLGA8TH3BQL2 631 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 HIP1O00291 1037 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 HSD17B6O14756 317 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PSTPIP1O43586 416 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 CHST1O43916 411 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 SCRG1O75711 98 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 GPX5O75715 221 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 BBOX1O75936 387 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 SLC2A10O95528 541 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 SNAI1O95863 264 aaPredicted RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 MMP1P03956 469 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 FGF1P05230 155 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 S100A9P06702 114 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 ERCC1P07992 297 aaPredicted RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 STSP08842 583 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 CT62P0C5K7 136 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 ZNF853P0CG23 659 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 MSR1P21757 451 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PTBP1P26599 531 aaKnown RBP eCLIP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 GDF1P27539 372 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 CALCRP30988 508 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 HNRNPH3P31942 346 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 IFNA8P32881 189 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 HMGCLP35914 325 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 ATP5C1P36542 298 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 DDOSTP39656 456 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 KIR2DS2P43631 304 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 SLC11A1P49279 550 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 CSNK1EP49674 416 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 ETV1P50549 477 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 HLCSP50747 726 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 KPNA2P52292 529 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 WNT4P56705 351 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 RPL32P62910 135 aaKnown RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PAX5Q02548 391 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 IFT88Q13099 833 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 PPIL2Q13356 520 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 CUL1Q13616 776 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 SERTAD2Q14140 314 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 KIAA0040Q15053 153 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 DUSP7Q16829 419 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 ALKBH6Q3KRA9 238 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 CARD16Q5EG05 197 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 AADACL4Q5VUY2 407 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 TTC19Q6DKK2 380 aaPredicted RBP1.77□□□□□ -2.13
LMNB1-207ENST00000494185 TMEM53Q6P2H8 277 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 LRRC31Q6UY01 552 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 TFAP2EQ6VUC0 442 aa1.77□□□□□ -2.13
LMNB1-207ENST00000494185 CERS6Q6ZMG9 384 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms