RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 MRASO14807 208 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 CLOCKO15516 846 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 VAMP5O95183 116 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 LGI1O95970 557 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 PNMTP11086 282 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 PTNP21246 168 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 PCGF2P35227 344 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 CDH12P55289 794 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 NCALDP61601 193 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 NKX6-1P78426 367 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-209ENST00000484305 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 FOXD4Q12950 439 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-209ENST00000484305 NPTX1Q15818 432 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 GABRA6Q16445 453 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 VMACQ2NL98 169 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 MMEL1Q495T6 779 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 COQ5Q5HYK3 327 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 C9orf135Q5VTT2 229 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 CREB3L2Q70SY1 520 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 P2RY8Q86VZ1 359 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 CALHM3Q86XJ0 350 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 EPHX4Q8IUS5 362 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 SLC30A8Q8IWU4 369 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 KDM8Q8N371 416 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 OR52N5Q8NH56 324 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 RNF217Q8TC41 542 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 C10orf82Q8WW14 230 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 AKAP1Q92667 903 aaKnown RBP eCLIP11.35□□□□□ -0.59
HDAC1-209ENST00000484305 NEUROG1Q92886 237 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 TAMM41Q96BW9 452 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 SLC47A1Q96FL8 570 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 MUS81Q96NY9 551 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 PIP5K1AQ99755 562 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 ARHGDIGQ99819 225 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 TMEM27Q9HBJ8 222 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 MRGBPQ9NV56 204 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 ARMCX1Q9P291 453 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 UPB1Q9UBR1 384 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 RNF115Q9Y4L5 304 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 HEATR1Q9H583 2144 aaKnown RBP11.35□□□□□ -0.59
HDAC1-209ENST00000484305 FLNAP21333 2647 aaKnown RBP11.34□□□□□ -0.59
HDAC1-209ENST00000484305 USF3Q68DE3 2245 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 BBIP1A8MTZ0 92 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 SMPD2O60906 423 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 FZD7O75084 574 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 NPPAP01160 153 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 C8BP07358 591 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 CD3EP07766 207 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 CD247P20963 164 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 CBLP22681 906 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 CRYBA2P53672 197 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 LGALS3BPQ08380 585 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 MAPRE2Q15555 327 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 NRF1Q16656 503 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 FAM69AQ5T7M9 428 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 C5orf46Q6UWT4 87 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 PATL1Q86TB9 770 aaKnown RBP11.34□□□□□ -0.59
HDAC1-209ENST00000484305 RANBP3LQ86VV4 465 aaPredicted RBP11.34□□□□□ -0.59
HDAC1-209ENST00000484305 RBM45Q8IUH3 476 aaKnown RBP11.34□□□□□ -0.59
HDAC1-209ENST00000484305 ZNF611Q8N823 705 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 OR8J3Q8NGG0 315 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 OR4D11Q8NGI4 311 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 OR6T1Q8NGN1 323 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 IGFBPL1Q8WX77 278 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 MCHR1Q99705 422 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 SH3GL1Q99961 368 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 ECSITQ9BQ95 431 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 AMBRA1Q9C0C7 1298 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 SLCO5A1Q9H2Y9 848 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 EVA1AQ9H8M9 152 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 SELENONQ9NZV5 590 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 USP22Q9UPT9 525 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 RASD1Q9Y272 281 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 SLC25A15Q9Y619 301 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 ALPK2Q86TB3 2170 aa11.34□□□□□ -0.59
HDAC1-209ENST00000484305 TRAV36DV7A0A075B6V5 113 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 M0R082 166 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 ATP8B1O43520 1251 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 OR2T1O43869 369 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 GTF2E2P29084 291 aaKnown RBP11.33□□□□□ -0.6
HDAC1-209ENST00000484305 GRPRP30550 384 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 SELENOPP49908 381 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 LTBQ06643 244 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 ENTPD8Q5MY95 495 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 INTS11Q5TA45 600 aaKnown RBP11.33□□□□□ -0.6
HDAC1-209ENST00000484305 OR7E24Q6IFN5 339 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 ADAM5Q6NVV9 412 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 NIPAL3Q6P499 406 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 CCDC80Q76M96 950 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 TSPYL5Q86VY4 417 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-209ENST00000484305 LRRC75A-AS1Q8N1F1 130 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 POU5F2Q8N7G0 328 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 WDR31Q8NA23 367 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 POMGNT2Q8NAT1 580 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 KBTBD8Q8NFY9 601 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 VANGL1Q8TAA9 524 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF417Q8TAU3 575 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 SLC26A7Q8TE54 656 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 ZNF583Q96ND8 569 aa11.33□□□□□ -0.6
HDAC1-209ENST00000484305 OXGR1Q96P68 337 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms