RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PAHP00439 452 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 APRTP07741 180 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 SERPINB1P30740 379 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 MDH2P40926 338 aaKnown RBP5.34□□□□□ -1.55
HDAC3-206ENST00000471968 SLC1A1P43005 524 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ROR2Q01974 943 aaKnown RBP5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF117Q03924 483 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 E2F2Q14209 437 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 GLE1Q53GS7 698 aaKnown RBP5.34□□□□□ -1.55
HDAC3-206ENST00000471968 METTL11BQ5VVY1 283 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 SLC27A4Q6P1M0 643 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 LINGO2Q7L985 606 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 AAED1Q7RTV5 226 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 LAS2Q8IYD9 372 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 KATNAL2Q8IYT4 538 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF675Q8TD23 568 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 MYDGFQ969H8 173 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ESAMQ96AP7 390 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF524Q96C55 264 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 CNRIP1Q96F85 164 aaPredicted RBP5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF681Q96N22 645 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 SERPINB12Q96P63 405 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF649Q9BS31 505 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 QRSL1Q9H0R6 528 aaKnown RBP5.34□□□□□ -1.55
HDAC3-206ENST00000471968 OR51B6Q9H340 312 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 RAB18Q9NP72 206 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 RCE1Q9Y256 329 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 ZNF780BQ9Y6R6 833 aa5.34□□□□□ -1.55
HDAC3-206ENST00000471968 GXYLT2A0PJZ3 443 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 TMEM229AB2RXF0 380 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 OIP5O43482 229 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 CHST1O43916 411 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 CCNT2O60583 730 aaKnown RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 ESRRBO95718 433 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 IFNA6P05013 189 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 LTA4HP09960 611 aaKnown RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 TFPIP10646 304 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 HPGDP15428 266 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 DRD4P21917 467 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 PITPNBP48739 271 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 MMP15P51511 669 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 ARFIP1P53367 373 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 ERVS71-1P61550 626 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 ARF1P84077 181 aaKnown RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 PDAP1Q13442 181 aaKnown RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 SLC29A2Q14542 456 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 RASA2Q15283 850 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 PDK4Q16654 411 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 ARHGAP11BQ3KRB8 267 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 SYT14P1Q58G82 188 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 RBM20Q5T481 1227 aaKnown RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 PRAMEF8Q5VWM4 474 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 PRAMEF7Q5VXH5 474 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 CBLN3Q6UW01 205 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 FRA10AC1Q70Z53 315 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 MISPQ8IVT2 679 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 RBM15BQ8NDT2 890 aaKnown RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 ERP27Q96DN0 273 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 NEIL1Q96FI4 390 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 C18orf15Q96N68 181 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 ZNF385AQ96PM9 386 aaKnown RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 ASPNQ9BXN1 380 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 CNOT10Q9H9A5 744 aaKnown RBP5.33□□□□□ -1.56
HDAC3-206ENST00000471968 BFARQ9NZS9 450 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 SENP1Q9P0U3 644 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 CLN8Q9UBY8 286 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 SLC7A8Q9UHI5 535 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 DNAH5Q8TE73 4624 aa5.33□□□□□ -1.56
HDAC3-206ENST00000471968 A0A1W2PRD5 423 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 A0A1W2PRF3 423 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 A0A1W2PRM7 423 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 MEGF11A6BM72 1044 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 SYNGR1O43759 233 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 UPK3AO75631 287 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 ZNF205O95201 554 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 KCNH1O95259 989 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 HLA-HP01893 362 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 LCKP06239 509 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 KLK1P06870 262 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 HCKP08631 526 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 CD79AP11912 226 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 ZNF250P15622 560 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 EPORP19235 508 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 PTX3P26022 381 aaPredicted RBP5.32□□□□□ -1.56
HDAC3-206ENST00000471968 CNTFRP26992 372 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 LSP1P33241 339 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 GABRA3P34903 492 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 CRHR1P34998 444 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 FDFT1P37268 417 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 HSPA7P48741 367 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 ALDH9A1P49189 494 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 THBS3P49746 956 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 OR2B6P58173 313 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 CDKL1Q00532 357 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 PIGFQ07326 219 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 TBCCQ15814 346 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 TMEM95Q3KNT9 176 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 TIGD2Q4W5G0 525 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 IL23RQ5VWK5 629 aa5.32□□□□□ -1.56
HDAC3-206ENST00000471968 ZNF572Q7Z3I7 529 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms