RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ELK4P28324 431 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 GRPRP30550 384 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 UQCRC1P31930 480 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 NTF4P34130 210 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 GPR4P46093 362 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 DIO1P49895 249 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 RAC3P60763 192 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ESRRGP62508 458 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 RPS4XP62701 263 aaKnown RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 TAGLNQ01995 201 aaKnown RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 KLRB1Q12918 225 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 NPRL3Q12980 569 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ANKDD1AQ495B1 522 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 SLC36A3Q495N2 470 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 GXYLT1Q4G148 440 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 SYT14P1Q58G82 188 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 EMC4Q5J8M3 183 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 FAM69AQ5T7M9 428 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 RAET1LQ5VY80 246 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 TMEM236Q5W0B7 351 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 Q6ZPB1 254 aaPredicted RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 ESPNLQ6ZVH7 1005 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 H1FNTQ75WM6 255 aaPredicted RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 GALNT5Q7Z7M9 940 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 OAFQ86UD1 273 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 CCDC103Q8IW40 242 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 KDM8Q8N371 416 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 PARP8Q8N3A8 854 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 TMEM99Q8N816 258 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ZIC4Q8N9L1 334 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ATG16L2Q8NAA4 619 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 FAM98AQ8NCA5 519 aaKnown RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 OR8D4Q8NGM9 314 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 MOSPD2Q8NHP6 518 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 SLC25A43Q8WUT9 341 aaPredicted RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 PTP4A1Q93096 173 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 DDIT4LQ96D03 193 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 DNAJA3Q96EY1 480 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 SAMD8Q96LT4 415 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 KLHL15Q96M94 604 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 SFXN2Q96NB2 322 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 OR5B2Q96R09 309 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 TOR3AQ9H497 397 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 EGLN3Q9H6Z9 239 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 TMEM185BQ9H7F4 350 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 PAPOLBQ9NRJ5 636 aaKnown RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 ASF1BQ9NVP2 202 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 MRPL39Q9NYK5 338 aaKnown RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 LUZP4Q9P127 313 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 TNFRSF10DQ9UBN6 386 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 B4GALT7Q9UBV7 327 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ZNF229Q9UJW7 825 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ING1Q9UK53 422 aaPredicted RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 DKKL1Q9UK85 242 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 NDRG4Q9ULP0 352 aaKnown RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 NPIPA1Q9UND3 350 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 TMEM5Q9Y2B1 443 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 PTPRQQ9UMZ3 2332 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ANKRD11Q6UB99 2663 aaPredicted RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 LOC100130705A0A1B0GUX0 176 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ZAR1LA6NP61 321 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 AHRRA9YTQ3 701 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 H0YAE9 185 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 BLOC1S5-TXNDC5H3BN57 136 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ERVH48-1M5A8F1 160 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 SULT2B1O00204 365 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 BHLHE40O14503 412 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 TNFSF11O14788 317 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 TFECO14948 347 aaPredicted RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 DENRO43583 198 aaKnown RBP5.32□□□□□ -1.56
USP39-213ENST00000467885 CXCL13O43927 109 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 AKR7A3O95154 331 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 RCBTB2O95199 551 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 AHSA1O95433 338 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 HIST1H2ABP04908 130 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 HLA-DOBP13765 273 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ZNF24P17028 368 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 SFTPDP35247 375 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 IDUAP35475 653 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 AQP2P41181 271 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 SLC9A3P48764 834 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 TDGF1P3P51864 188 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 AQP4P55087 323 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 OR2B6P58173 313 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ISL1P61371 349 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 SLC35A1P78382 337 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 HSF1Q00613 529 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 SELENBP1Q13228 472 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 PMS2P3Q13401 168 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 GINS1Q14691 196 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 MFSD13AQ14CX5 517 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 OR7A5Q15622 319 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 INAQ16352 499 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 ST3GAL2Q16842 350 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 HBMQ6B0K9 141 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 TMEM225Q6GV28 225 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 C3orf33Q6P1S2 294 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 SMARCD3Q6STE5 483 aa5.32□□□□□ -1.56
USP39-213ENST00000467885 USP51Q70EK9 711 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms