RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SFRP5Q5T4F7 317 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 WDR88Q6ZMY6 472 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 C22orf34Q6ZV56 151 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 CDC20BQ86Y33 519 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 STEAP2Q8NFT2 490 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 ZNF417Q8TAU3 575 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 NRGNQ92686 78 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 TAAR8Q969N4 342 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 TMEM45BQ96B21 275 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 S100PBPQ96BU1 408 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 LRRC37BQ96QE4 947 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 ZNF587Q96SQ5 575 aaPredicted RBP11.41□□□□□ -0.58
COL5A1-206ENST00000465877 EPYCQ99645 322 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 KCTD14Q9BQ13 255 aaPredicted RBP11.41□□□□□ -0.58
COL5A1-206ENST00000465877 TMEM43Q9BTV4 400 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 SPAG4Q9NPE6 437 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 RASD1Q9Y272 281 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 SH3GLB1Q9Y371 365 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 PRR14LQ5THK1 2151 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 TRAPPC13A5PLN9 417 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 DEFB108AA8MXU0 73 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 CXCR6O00574 342 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 NDUFAB1O14561 156 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 CASKO14936 926 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 SHOX2O60902 331 aaPredicted RBP11.4□□□□□ -0.58
COL5A1-206ENST00000465877 VAMP5O95183 116 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 LYPD3O95274 346 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 THY1P04216 161 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 IGHV1-2P23083 117 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 GRPRP30550 384 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 KDELR2P33947 212 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 ITGADQ13349 1161 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 FBXW9Q5XUX1 488 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 TMEM225Q6GV28 225 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 DEF8Q6ZN54 512 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 BHLHA15Q7RTS1 189 aaPredicted RBP11.4□□□□□ -0.58
COL5A1-206ENST00000465877 UBE2J2Q8N2K1 259 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 ADPRHL1Q8NDY3 354 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 TPD52L3Q96J77 140 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 ZNF385AQ96PM9 386 aaKnown RBP11.4□□□□□ -0.58
COL5A1-206ENST00000465877 CCT8L2Q96SF2 557 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 FAM53CQ9NYF3 392 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 SLC7A7Q9UM01 511 aa11.4□□□□□ -0.58
COL5A1-206ENST00000465877 CREBBPQ92793 2442 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 A0A1W2PPR1 153 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 LRRN3E7EW58 273 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 GSTA4O15217 222 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 FAM107AO95990 144 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 BGLAPP02818 100 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 CBLP22681 906 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 OR1E2P47887 323 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 TAS2R41P59536 307 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 MFSD13AQ14CX5 517 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 GKAP1Q5VSY0 366 aaPredicted RBP11.39□□□□□ -0.59
COL5A1-206ENST00000465877 PAMR1Q6UXH9 720 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 LINC00114Q6XXX2 140 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 WFDC8Q8IUA0 241 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 ANKS4BQ8N8V4 417 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 ZIC4Q8N9L1 334 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 SCAIQ8N9R8 606 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 OR6S1Q8NH40 331 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 PIK3IP1Q96FE7 263 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 SLC41A3Q96GZ6 507 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 MOGAT1Q96PD6 335 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF426Q9BUY5 554 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 HDHD5Q9BXW7 423 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 POLR2J2Q9GZM3 115 aaKnown RBP11.39□□□□□ -0.59
COL5A1-206ENST00000465877 POLR2J3Q9H1A7 115 aaKnown RBP11.39□□□□□ -0.59
COL5A1-206ENST00000465877 SLCO5A1Q9H2Y9 848 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 ARL8BQ9NVJ2 186 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 ASB6Q9NWX5 421 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 B3GAT1Q9P2W7 334 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 TAGLN3Q9UI15 199 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 B3GALT5Q9Y2C3 310 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 CORINQ9Y5Q5 1042 aa11.39□□□□□ -0.59
COL5A1-206ENST00000465877 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-206ENST00000465877 KPNA4O00629 521 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-206ENST00000465877 RAD51DO75771 328 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 OR5F1O95221 314 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 ZNF682O95780 498 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 ITGA5P08648 1049 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 NQO1P15559 274 aaKnown RBP11.38□□□□□ -0.59
COL5A1-206ENST00000465877 NCK1P16333 377 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 LOXP28300 417 aaPredicted RBP11.38□□□□□ -0.59
COL5A1-206ENST00000465877 DNAJA1P31689 397 aaKnown RBP11.38□□□□□ -0.59
COL5A1-206ENST00000465877 SELENOPP49908 381 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 SELENOWP63302 87 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 LTBQ06643 244 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 FAPQ12884 760 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 TAB1Q15750 504 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 STK11Q15831 433 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 TSPO2Q5TGU0 170 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 CREB3L2Q70SY1 520 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 AAED1Q7RTV5 226 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 VTCN1Q7Z7D3 282 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 PGAM4Q8N0Y7 254 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 KDM8Q8N371 416 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 LZICQ8WZA0 190 aa11.38□□□□□ -0.59
COL5A1-206ENST00000465877 FAM162AQ96A26 154 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms