RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 KCNK17Q96T54 332 aa18.12■□□□□ 0.49
CPNE1-219ENST00000440240 KCNS3Q9BQ31 491 aa18.12■□□□□ 0.49
CPNE1-219ENST00000440240 MANSC1Q9H8J5 431 aa18.12■□□□□ 0.49
CPNE1-219ENST00000440240 SLC6A13Q9NSD5 602 aa18.12■□□□□ 0.49
CPNE1-219ENST00000440240 TMEM160Q9NX00 188 aa18.12■□□□□ 0.49
CPNE1-219ENST00000440240 ZIM2Q9NZV7 527 aa18.12■□□□□ 0.49
CPNE1-219ENST00000440240 RASD1Q9Y272 281 aa18.12■□□□□ 0.49
CPNE1-219ENST00000440240 IFT52Q9Y366 437 aa18.12■□□□□ 0.49
CPNE1-219ENST00000440240 ZNF587BE7ETH6 402 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 USF1P22415 310 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-219ENST00000440240 WDR4P57081 412 aaKnown RBP18.11■□□□□ 0.49
CPNE1-219ENST00000440240 SWI5Q1ZZU3 235 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 PRAMEF8Q5VWM4 474 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 PRAMEF7Q5VXH5 474 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 CLIP4Q8N3C7 705 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 STK35Q8TDR2 534 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 NANOS1Q8WY41 292 aaKnown RBP18.11■□□□□ 0.49
CPNE1-219ENST00000440240 TMEM158Q8WZ71 300 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 FBXO17Q96EF6 278 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 MAELQ96JY0 434 aaKnown RBP18.11■□□□□ 0.49
CPNE1-219ENST00000440240 SPATA9Q9BWV2 254 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 MOV10Q9HCE1 1003 aaKnown RBP18.11■□□□□ 0.49
CPNE1-219ENST00000440240 SDR39U1Q9NRG7 319 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-219ENST00000440240 RAB21Q9UL25 225 aa18.11■□□□□ 0.49
CPNE1-219ENST00000440240 TMEM120BA0PK00 339 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 NPIPB7O75200 414 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 CRYAAP02489 173 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 P2RY4P51582 365 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 UBE2NP61088 152 aaKnown RBP18.1■□□□□ 0.49
CPNE1-219ENST00000440240 MST1LQ2TV78 715 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 TBRG1Q3YBR2 411 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 OR1K1Q8NGR3 316 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 MFSD8Q8NHS3 518 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 SLC38A2Q96QD8 506 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 KATNB1Q9BVA0 655 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 BEX2Q9BXY8 128 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 FKBP7Q9Y680 259 aa18.1■□□□□ 0.49
CPNE1-219ENST00000440240 NDUFS8O00217 210 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 FRS3O43559 492 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 AHSA1O95433 338 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 PRG2P13727 222 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 HOXB1P14653 301 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-219ENST00000440240 SERPINF1P36955 418 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 SELENOPP49908 381 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 SLC18A1P54219 525 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 SNRPD2P62316 118 aaKnown RBP18.09■□□□□ 0.49
CPNE1-219ENST00000440240 LSM11P83369 360 aaKnown RBP eCLIP18.09■□□□□ 0.49
CPNE1-219ENST00000440240 C6orf10Q5SRN2 563 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 EPHX4Q8IUS5 362 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 MAGEE2Q8TD90 523 aaPredicted RBP18.09■□□□□ 0.49
CPNE1-219ENST00000440240 SLC35B4Q969S0 331 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 C3orf49Q96BT1 292 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 ZBTB9Q96C00 473 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 TMEM19Q96HH6 336 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 LINC00470Q9BZP3 86 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 LPAR3Q9UBY5 353 aa18.09■□□□□ 0.49
CPNE1-219ENST00000440240 ARPC4-TTLL3A0A0A6YYG9 625 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 IGHV1-18A0A0C4DH31 117 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 TMEM229AB2RXF0 380 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 UBDO15205 165 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 LGI1O95970 557 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 PDLIM4P50479 330 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 POLR2JP52435 117 aaKnown RBP18.08■□□□□ 0.48
CPNE1-219ENST00000440240 C3orf36Q3SXR2 165 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 ZNF311Q5JNZ3 666 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 NIPAL3Q6P499 406 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 ANKRD16Q6P6B7 361 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 SERPINA11Q86U17 422 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 LSRQ86X29 649 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-219ENST00000440240 ANKK1Q8NFD2 765 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 MGARPQ8TDB4 240 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 BCL2L2Q92843 193 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-219ENST00000440240 BCL2L10Q9HD36 194 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 CA10Q9NS85 328 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 CHST2Q9Y4C5 530 aa18.08■□□□□ 0.48
CPNE1-219ENST00000440240 B9A039 149 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 LY6HO94772 140 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 ZNF43P17038 809 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 GZMKP49863 264 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 SH3BGRP55822 239 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-219ENST00000440240 RGNQ15493 299 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 SLC9B1Q4ZJI4 515 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 RPS26P11Q5JNZ5 115 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-219ENST00000440240 MIER2Q8N344 545 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 FAM169BQ8N8A8 192 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 SLC25A36Q96CQ1 311 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 ALKBH3Q96Q83 286 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-219ENST00000440240 RAD21L1Q9H4I0 556 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 MYOZ1Q9NP98 299 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-219ENST00000440240 CRNNQ9UBG3 495 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-219ENST00000440240 FBXO9Q9UK97 447 aaPredicted RBP18.07■□□□□ 0.48
CPNE1-219ENST00000440240 ARFGEF3Q5TH69 2177 aa18.07■□□□□ 0.48
CPNE1-219ENST00000440240 CUBNO60494 3623 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 VSTM5A8MXK1 200 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 FTCDNL1E5RQL4 147 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 CLIC1O00299 241 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 OR2T1O43869 369 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 UPK3AO75631 287 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 PDE5AO76074 875 aa18.06■□□□□ 0.48
CPNE1-219ENST00000440240 IGHV4-31P0DP07 118 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms