RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 SRSF1Q07955 248 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TPBGQ13641 420 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TMEM35AQ53FP2 167 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 METTL7BQ6UX53 244 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 GDPD4Q6W3E5 623 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ZNF836Q6ZNA1 936 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 UNC93AQ86WB7 457 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CMTM1Q8IZ96 169 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MS4A15Q8N5U1 240 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SLC16A11Q8NCK7 471 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ZNF738Q8NE65 137 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 OR7A2PQ8NGA2 310 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 C8orf46Q8TAG6 207 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MAGEC3Q8TD91 643 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ABTB1Q969K4 478 aaPredicted RBP4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NEIL2Q969S2 332 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CAPNS2Q96L46 248 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PACRGQ96M98 296 aaPredicted RBP4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CPXM1Q96SM3 734 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RBBP8Q99708 897 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SH3GL3Q99963 347 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NEURL2Q9BR09 285 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PELI2Q9HAT8 420 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RETNQ9HD89 108 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 C1orf109Q9NX04 203 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CLEC4EQ9ULY5 219 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SCML2Q9UQR0 700 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SYNJ2O15056 1496 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 FHAD1B1AJZ9 1412 aa4.79□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ZCWPW2A0A1B0GU75 182 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 hDV102S1A0JD36 115 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ANHXE9PGG2 379 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 WDR1O75083 606 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 FGF19O95750 216 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 IFNA14P01570 189 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RPS17P08708 135 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 FGF2P09038 288 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ABOP16442 354 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CTRB1P17538 263 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 OPRD1P41143 372 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TNFSF9P41273 254 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MAP3K8P41279 467 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 DNA2P51530 1060 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 RPL27P61353 136 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 S100A12P80511 92 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ID2Q02363 134 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 C2orf80Q0P641 193 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TMEM249Q2WGJ8 235 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NDUFAF6Q330K2 333 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 GTDC1Q4AE62 458 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CEP85LQ5SZL2 805 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TPRG1LQ5T0D9 272 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 IDNKQ5T6J7 187 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CTRB2Q6GPI1 263 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SPESP1Q6UW49 350 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 APTXQ7Z2E3 356 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TIPARPQ7Z3E1 657 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 NUFIP2Q7Z417 695 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TMEM25Q86YD3 366 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 APOBEC3FQ8IUX4 373 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 DCP1BQ8IZD4 617 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TPRX1Q8N7U7 411 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 OR5T2Q8NGG2 359 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 OR1J1Q8NGS3 322 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CDS1Q92903 461 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PSMG2Q969U7 264 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ZBED6CLQ96FA7 236 aaPredicted RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MBOAT7Q96N66 472 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MICU1Q9BPX6 476 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 CHRNA10Q9GZZ6 450 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MMP28Q9H239 520 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TUBB1Q9H4B7 451 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PATZ1Q9HBE1 687 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 FGF20Q9NP95 211 aaPredicted RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 PLEKHJ1Q9NW61 149 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TAS2R7Q9NYW3 318 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 MAN1B1Q9UKM7 699 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 ICAM5Q9UMF0 924 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 EXOSC1Q9Y3B2 195 aaKnown RBP4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 SAR1BQ9Y6B6 198 aa4.78□□□□□ -1.64
PTP4A1P1-201ENST00000420539 TAF1P21675 1872 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 USP42Q9H9J4 1324 aaKnown RBP4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 A0A0G2JK05 382 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 A0A0G2JNG1 304 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 ARGFXA6NJG6 315 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 H3BNX3 289 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 K7EN84 100 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 GOSR2O14653 212 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 EI24O14681 340 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 JTBO76095 146 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 OCM2P0CE71 109 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 FAM106CPP0CH98 169 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 COX5BP10606 129 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 MYOD1P15172 320 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 POLR2EP19388 210 aaKnown RBP4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 FASP25445 335 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 LMO1P25800 156 aa4.77□□□□□ -1.65
PTP4A1P1-201ENST00000420539 MNAT1P51948 309 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms