RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ADAD1Q96M93 576 aaKnown RBP5.66□□□□□ -1.5
USP54-202ENST00000413442 ZNF583Q96ND8 569 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ARHGDIGQ99819 225 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 TMEM204Q9BSN7 226 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ASPNQ9BXN1 380 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 AMBRA1Q9C0C7 1298 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ACTR6Q9GZN1 396 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 SLCO5A1Q9H2Y9 848 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 C12orf49Q9H741 205 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 FAIMQ9NVQ4 179 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 ADPRHL2Q9NX46 363 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 MRPL39Q9NYK5 338 aaKnown RBP5.66□□□□□ -1.5
USP54-202ENST00000413442 FBXL3Q9UKT7 428 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 CHST2Q9Y4C5 530 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 NOX1Q9Y5S8 564 aa5.66□□□□□ -1.5
USP54-202ENST00000413442 NAV2Q8IVL1 2488 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 A0A1B0GWA3 101 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 DEFB108AA8MXU0 73 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 FAM220BPB1ANY3 271 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 PDLIM1O00151 329 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 FRS3O43559 492 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 SNX3O60493 162 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 TPST1O60507 370 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 KRT33AO76009 404 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 CD3EP07766 207 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 GKN3PP0CG01 181 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 NR2C1P13056 603 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 COX4I1P13073 169 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 HOXB6P17509 224 aaKnown RBP5.65□□□□□ -1.5
USP54-202ENST00000413442 HOXC12P31275 282 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 IST1P53990 364 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 PRPS1P60891 318 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 ST3GAL3Q11203 375 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 PPA1Q15181 289 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 TAF11Q15544 211 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 OR7A5Q15622 319 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 GABRA6Q16445 453 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 EXOC3L2Q2M3D2 409 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 DEFB113Q30KQ7 82 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 NRN1LQ496H8 165 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 DPPA2Q7Z7J5 298 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 CXorf67Q86X51 503 aaPredicted RBP5.65□□□□□ -1.5
USP54-202ENST00000413442 CDK20Q8IZL9 346 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 ARHGAP24Q8N264 748 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 TMEM99Q8N816 258 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 PIK3C3Q8NEB9 887 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 OR2T12Q8NG77 320 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 OR9K2Q8NGE7 335 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 TRMT61AQ96FX7 289 aaKnown RBP5.65□□□□□ -1.5
USP54-202ENST00000413442 MCHR1Q99705 422 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 KLHDC3Q9BQ90 382 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 OR11A1Q9GZK7 315 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 ANKRD19PQ9H560 264 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 IKZF5Q9H5V7 419 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 CXorf56Q9H5V9 222 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 OCEL1Q9H607 264 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 FKRPQ9H9S5 495 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 B3GAT2Q9NPZ5 323 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 RPS6KA6Q9UK32 745 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 CLEC4AQ9UMR7 237 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 ARL2BPQ9Y2Y0 163 aa5.65□□□□□ -1.5
USP54-202ENST00000413442 DCHS2Q6V1P9 2916 aa5.65□□□□□ -1.51
USP54-202ENST00000413442 PDZD2O15018 2839 aa5.65□□□□□ -1.51
USP54-202ENST00000413442 NPIPB13A6NJU9 1138 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 CCT8L1PA6NM43 557 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ZNF726A6NNF4 738 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 NPIPB4C9JG80 1138 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ZNF587BE7ETH6 402 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 SLC43A1O75387 559 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 AKR7A3O95154 331 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 OR5F1O95221 314 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 OR6A2O95222 327 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ATE1O95260 518 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 C1QCP02747 245 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 THBDP07204 575 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 PRG2P13727 222 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ITGA2P17301 1181 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 CCNA2P20248 432 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 IGHV1-2P23083 117 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 LSP1P33241 339 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 ART1P52961 327 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 SMIM11AP58511 58 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 MTPNP58546 118 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 KRTAP10-9P60411 292 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 EGR4Q05215 589 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 DMTNQ08495 405 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 FAPQ12884 760 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 PMS2P3Q13401 168 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 C1DQ13901 141 aaKnown RBP5.64□□□□□ -1.51
USP54-202ENST00000413442 CAPRIN1Q14444 709 aaKnown RBP5.64□□□□□ -1.51
USP54-202ENST00000413442 TAB1Q15750 504 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 RPS26P11Q5JNZ5 115 aaPredicted RBP5.64□□□□□ -1.51
USP54-202ENST00000413442 ENTPD8Q5MY95 495 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 REP15Q6BDI9 236 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 CGB2Q6NT52 195 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 C8orf82Q6P1X6 216 aaPredicted RBP5.64□□□□□ -1.51
USP54-202ENST00000413442 ANKRD16Q6P6B7 361 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 KLHL24Q6TFL4 600 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 SEZ6L2Q6UXD5 910 aa5.64□□□□□ -1.51
USP54-202ENST00000413442 CASP12Q6UXS9 341 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms