RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ST8SIA1Q92185 356 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 KIAA1143Q96AT1 154 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 ARL5BQ96KC2 179 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 NEURL2Q9BR09 285 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 ANGPTL4Q9BY76 406 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 CPNE5Q9HCH3 593 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 ACOT13Q9NPJ3 140 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 STMN3Q9NZ72 180 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 TRAV36DV7A0A075B6V5 113 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 EFCAB10A6NFE3 127 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 A8MVM7 634 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 H3BML4 177 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 SLC30A4O14863 429 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 BGLAPP02818 100 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 F13BP05160 661 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 INHBBP09529 407 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 CD82P27701 267 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 PSMB9P28065 219 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 MSX1P28360 303 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 DNASE1L1P49184 302 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 RPS3AP61247 264 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 NFATC3Q12968 1075 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 SNTA1Q13424 505 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 TUBA3CQ13748 450 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 AADACL4Q5VUY2 407 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 C1orf140Q5VVS0 124 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 MEDAGQ5VYS4 303 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 CXXC5Q7LFL8 322 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 ZNF227Q86WZ6 799 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 OR4K13Q8NH42 304 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 RORBQ92753 470 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 FRMD6Q96NE9 622 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 KATNB1Q9BVA0 655 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 TMEM185BQ9H7F4 350 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 CMC2Q9NRP2 79 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 CHRNA9Q9UGM1 479 aa11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 RPL36Q9Y3U8 105 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 URB1O60287 2271 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-203ENST00000389980 DMXL2Q8TDJ6 3036 aa11.02□□□□□ -0.64
SPTBN1-203ENST00000389980 KDM4EB2RXH2 506 aaPredicted RBP11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 IMPA2O14732 288 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 PRODHO43272 600 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 NPIPB7O75200 414 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 SERPINI2O75830 405 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 PRKAR1AP10644 381 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 CLUP10909 449 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 PEPDP12955 493 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 HIST1H1CP16403 213 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 HTR3AP46098 478 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 TMBIM6P55061 237 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 OC90Q02509 493 aaPredicted RBP11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 AQP6Q13520 282 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 CRMP1Q14194 572 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 SPCS2Q15005 226 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 SLC6A19Q695T7 634 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 SLC16A12Q6ZSM3 486 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 NANOGNBQ7Z5D8 188 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 PLCZ1Q86YW0 608 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 FADS6Q8N9I5 356 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 SDR9C7Q8NEX9 313 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 RASD2Q96D21 266 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 C1GALT1C1Q96EU7 318 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 RNFT2Q96EX2 444 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 CNOT2Q9NZN8 540 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 RPH3AQ9Y2J0 694 aaPredicted RBP11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 PCDHGB1Q9Y5G3 927 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 CEP295Q9C0D2 2601 aa11.02□□□□□ -0.65
SPTBN1-203ENST00000389980 DCDC2BA2VCK2 349 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 A6NL46 340 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 NKX2-8O15522 239 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 SULT1C4O75897 302 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 PTHP01270 115 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 IGF2P01344 180 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 GYPBP06028 91 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 LIPCP11150 499 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 WT1P19544 449 aaPredicted RBP11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 CDH11P55287 796 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 GPR85P60893 370 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 RPL18Q07020 188 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 C19orf57Q0VDD7 668 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 CAMK2BQ13554 666 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 DOC2BQ14184 412 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 SPINK14Q6IE38 97 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 PAQR6Q6TCH4 344 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 LINC00299Q6ZSB3 139 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 CENPSQ8N2Z9 138 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 SVOPQ8N4V2 548 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 OR52E2Q8NGJ4 325 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 LIPHQ8WWY8 451 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 PTP4A1Q93096 173 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 UBL7Q96S82 380 aaPredicted RBP11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 SECISBP2Q96T21 854 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 FN3KQ9H479 309 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 CLEC2DQ9UHP7 191 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 CDV3Q9UKY7 258 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 HIF3AQ9Y2N7 669 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 MGAQ8IWI9 3026 aa11.01□□□□□ -0.65
SPTBN1-203ENST00000389980 ARGFXA6NJG6 315 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms