RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 BPIFB2Q8N4F0 458 aa16.12■□□□□ 0.17
PTPRU-202ENST00000373779 BOLLQ8N9W6 283 aaKnown RBP16.12■□□□□ 0.17
PTPRU-202ENST00000373779 CSNK2A3Q8NEV1 391 aa16.12■□□□□ 0.17
PTPRU-202ENST00000373779 FOXRED1Q96CU9 486 aaPredicted RBP16.12■□□□□ 0.17
PTPRU-202ENST00000373779 ICKQ9UPZ9 632 aa16.12■□□□□ 0.17
PTPRU-202ENST00000373779 KRBOX1C9JBD0 128 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 RAD51DO75771 328 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 KIR2DL3P43628 341 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 ARRB1P49407 418 aaPredicted RBP16.11■□□□□ 0.17
PTPRU-202ENST00000373779 GZMKP49863 264 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 SPOCK1Q08629 439 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 ARHGAP11BQ3KRB8 267 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 KIAA1958Q8N8K9 716 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 VN1R2Q8NFZ6 395 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 TMEM106AQ96A25 262 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 WASH6PQ9NQA3 447 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 TMEM82A0PJX8 343 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 LCMT2O60294 686 aaKnown RBP16.11■□□□□ 0.17
PTPRU-202ENST00000373779 TPT1P13693 172 aaKnown RBP16.11■□□□□ 0.17
PTPRU-202ENST00000373779 OC90Q02509 493 aaPredicted RBP16.11■□□□□ 0.17
PTPRU-202ENST00000373779 ZNF616Q08AN1 781 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 ERV3-1Q14264 604 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 OVCH1Q7RTY7 1134 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 UEVLDQ8IX04 471 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 SEC22CQ9BRL7 303 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 PLEKHM1Q9Y4G2 1056 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 OR51B4Q9Y5P0 310 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 H7C1C5 153 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 SULT1B1O43704 296 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 PAPLNO95428 1278 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 ZNF35P13682 527 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 LCN6P62502 163 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 ARSKQ6UWY0 536 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 EID2Q8N6I1 236 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 RBPMSQ93062 196 aaKnown RBP16.11■□□□□ 0.17
PTPRU-202ENST00000373779 ATF6BQ99941 703 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 CMC2Q9NRP2 79 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 COL4A5P29400 1685 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 PRAMEF26H0Y7S4 382 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 HRGP04196 525 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 THBS1P07996 1170 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 YBX1P67809 324 aaKnown RBP16.11■□□□□ 0.17
PTPRU-202ENST00000373779 TDGQ13569 410 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 NDUFAF7Q7L592 441 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 NCDNQ9UBB6 729 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 MAOAP21397 527 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 MFSD8Q8NHS3 518 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 STACQ99469 402 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 CCL27Q9Y4X3 112 aa16.11■□□□□ 0.17
PTPRU-202ENST00000373779 SELENOFO60613 162 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 CRTAPO75718 401 aaPredicted RBP16.1■□□□□ 0.17
PTPRU-202ENST00000373779 EIF4EP06730 217 aaKnown RBP16.1■□□□□ 0.17
PTPRU-202ENST00000373779 DGCR2P98153 550 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 ALKBH1Q13686 389 aaKnown RBP16.1■□□□□ 0.17
PTPRU-202ENST00000373779 SLC35D3Q5M8T2 416 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 TCTE3Q8IZS6 198 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 OR1J4Q8NGS1 313 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 SDF2Q99470 211 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 DEFB126Q9BYW3 111 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 MBNL1Q9NR56 388 aaKnown RBP16.1■□□□□ 0.17
PTPRU-202ENST00000373779 THAP10Q9P2Z0 257 aaPredicted RBP16.1■□□□□ 0.17
PTPRU-202ENST00000373779 A0A0D9SG52 128 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 CTSLP07711 333 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 NID1P14543 1247 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 GPLD1P80108 840 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 SSX1Q16384 188 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 VASNQ6EMK4 673 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 RFPL4BQ6ZWI9 263 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 ZNF595Q8IYB9 648 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 PDCD1LG2Q9BQ51 273 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 DSCR3O14972 297 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 KLK3P07288 261 aaPredicted RBP16.1■□□□□ 0.17
PTPRU-202ENST00000373779 RPL35P42766 123 aaKnown RBP16.1■□□□□ 0.17
PTPRU-202ENST00000373779 SSX6Q7RTT6 188 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 OR5L2Q8NGL0 311 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 ABI3Q9P2A4 366 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 EDARQ9UNE0 448 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 TRBV5-3A0A0A0MS03 114 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 PEX12O00623 359 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 ZNF264O43296 627 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 CA3P07451 260 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 IDO2Q6ZQW0 420 aa16.1■□□□□ 0.17
PTPRU-202ENST00000373779 FCMRO60667 390 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 CD53P19397 219 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 CRYBB2P43320 205 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 TRMT12Q53H54 448 aaKnown RBP16.09■□□□□ 0.17
PTPRU-202ENST00000373779 USP53Q70EK8 1073 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 ACBD4Q8NC06 268 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 NLGN4YQ8NFZ3 816 aaPredicted RBP16.09■□□□□ 0.17
PTPRU-202ENST00000373779 OR51T1Q8NGJ9 327 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 WDFY2Q96P53 400 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 KIR3DX1Q9H7L2 352 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 WDR76Q9H967 626 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 DUSP22Q9NRW4 184 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 FBXL2Q9UKC9 423 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 A4GNTQ9UNA3 340 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 S100A11P31949 105 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
PTPRU-202ENST00000373779 SOD1P00441 154 aa16.09■□□□□ 0.17
PTPRU-202ENST00000373779 LALBAP00709 142 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms