RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 KRCC1Q9NPI7 259 aaPredicted RBP12.6□□□□□ -0.39
VPS25-201ENST00000253794 NANSQ9NR45 359 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 GLRX2Q9NS18 164 aa12.6□□□□□ -0.39
VPS25-201ENST00000253794 ING1Q9UK53 422 aaPredicted RBP12.6□□□□□ -0.39
VPS25-201ENST00000253794 FLNCQ14315 2725 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 MPDZO75970 2070 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 A0A1W2PNV4 684 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 ZNF814B7Z6K7 855 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 LRRN3E7EW58 273 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 M0R082 166 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 KPNA4O00629 521 aaPredicted RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 SS18L1O75177 396 aaPredicted RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 AQP8O94778 261 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 CH25HO95992 272 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 IFI30P13284 250 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 MAKP20794 623 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 PTNP21246 168 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 FPR3P25089 353 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 IFNGR2P38484 337 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 ZP4Q12836 540 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 FHL1Q13642 323 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 MICAQ29983 383 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 GTF2IRD2BQ6EKJ0 949 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 HMBOX1Q6NT76 420 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 MTFR2Q6P444 385 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 SHQ1Q6PI26 577 aaKnown RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 H1FNTQ75WM6 255 aaPredicted RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 ZNF771Q7L3S4 317 aaPredicted RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 RRM2BQ7LG56 351 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 ZER1Q7Z7L7 766 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 GTF2IRD2Q86UP8 949 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 OR5J2Q8NH18 312 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 ZNF417Q8TAU3 575 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 LRTOMTQ8WZ04 291 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 CENPNQ96H22 339 aaPredicted RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 GMPPAQ96IJ6 420 aaPredicted RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 ZNF587Q96SQ5 575 aaPredicted RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 TACO1Q9BSH4 297 aaKnown RBP12.59□□□□□ -0.39
VPS25-201ENST00000253794 BDH2Q9BUT1 245 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 ASPNQ9BXN1 380 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 DGCR6LQ9BY27 220 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 RASD1Q9Y272 281 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 HIF3AQ9Y2N7 669 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 KIAA1549Q9HCM3 1950 aa12.59□□□□□ -0.39
VPS25-201ENST00000253794 ESPL1Q14674 2120 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 HIVEP3Q5T1R4 2406 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 ZNF724A8MTY0 619 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 PLPP3O14495 311 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 GNGT2O14610 69 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 OR10H3O60404 316 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 CCNB2O95067 398 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 AKR7A3O95154 331 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 FUT1P19526 365 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 KLK2P20151 261 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 GTF2E2P29084 291 aaKnown RBP12.58□□□□□ -0.4
VPS25-201ENST00000253794 UQCRC1P31930 480 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 GSSP48637 474 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 NUP107P57740 925 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 ELF3P78545 371 aaPredicted RBP12.58□□□□□ -0.4
VPS25-201ENST00000253794 SLC17A1Q14916 467 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 OTUD3Q5T2D3 398 aaPredicted RBP12.58□□□□□ -0.4
VPS25-201ENST00000253794 EEF1A1P5Q5VTE0 462 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 PGBD2Q6P3X8 592 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 CD300LDQ6UXZ3 194 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 NHLRC1Q6VVB1 395 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 C3P1Q6ZMU1 363 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 TMEM179BQ7Z7N9 219 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 CDK20Q8IZL9 346 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 TMEM99Q8N816 258 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 ROBO4Q8WZ75 1007 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 SLC25A36Q96CQ1 311 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 KLHL9Q9P2J3 617 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 B3GAT1Q9P2W7 334 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 SEC14L4Q9UDX3 406 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 U3KQV3 271 aa12.58□□□□□ -0.4
VPS25-201ENST00000253794 PHF3Q92576 2039 aaKnown RBP12.57□□□□□ -0.4
VPS25-201ENST00000253794 IGHV3-15A0A0B4J1V0 119 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 NPIPB13A6NJU9 1138 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 HSPB2A8KAH6 182 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 EFCAB9A8MZ26 197 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 NPIPB4C9JG80 1138 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 MS4A18H0YCH9 400 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 CCL21O00585 134 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 CDC42EP2O14613 210 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 LRRTM2O43300 516 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 RAMP1O60894 148 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 IL18BPO95998 194 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 IL2RAP01589 272 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 CBLP22681 906 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 IST1P53990 364 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 PUDPQ08623 228 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 RASGEF1BQ0VAM2 473 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 PPP1R8Q12972 351 aaKnown RBP12.57□□□□□ -0.4
VPS25-201ENST00000253794 TSPAN31Q12999 210 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 HSPB2Q16082 182 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 MS4A18Q3C1V0 323 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 P4HA3Q7Z4N8 544 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 NANOGNBQ7Z5D8 188 aa12.57□□□□□ -0.4
VPS25-201ENST00000253794 CCDC103Q8IW40 242 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms