RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TGM6O95932 706 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 VIPR2P41587 438 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 NPBWR1P48145 328 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 SNRPNP63162 240 aaKnown RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 FRRS1Q6ZNA5 592 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 TMEFF1Q8IYR6 380 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 BRIX1Q8TDN6 353 aaKnown RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 ACOT11Q8WXI4 607 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 CDS1Q92903 461 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 PELI1Q96FA3 418 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 FOXN4Q96NZ1 517 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 GFI1Q99684 422 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 GPN1Q9HCN4 374 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 GLS2Q9UI32 602 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 PCDHB10Q9UN67 800 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 ADAM18Q9Y3Q7 739 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 PIN1P1O15428 100 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 FADS1O60427 444 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 PABPC1L2AQ5JQF8 200 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 ZNF626Q68DY1 528 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 FAM199XQ6PEV8 388 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-227ENST00000640957 TSSK4Q6SA08 328 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 CD300LDQ6UXZ3 194 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 SLC39A11Q8N1S5 342 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 IRF7Q92985 503 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 CD180Q99467 661 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 JAM3Q9BX67 310 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 MEPEQ9NQ76 525 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-227ENST00000640957 AHSPQ9NZD4 102 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 GTF2A1LQ9UNN4 478 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 TRBV23OR9-2A0A075B6M9 112 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 C4orf51C9J302 202 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 PLPP2O43688 288 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 CCL5P13501 91 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 BDKRB2P30411 391 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 NDUFAF6Q330K2 333 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 TMPRSS12Q86WS5 348 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 LRRC56Q8IYG6 542 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-227ENST00000640957 OR2AK2Q8NG84 335 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 OR4C16Q8NGL9 310 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 TSSK2Q96PF2 358 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 TNFRSF13CQ96RJ3 184 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 RHBGQ9H310 441 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 CACYBPQ9HB71 228 aaKnown RBP12.66□□□□□ -0.38
SCARB2-227ENST00000640957 TCF20Q9UGU0 1960 aaKnown RBP12.66□□□□□ -0.38
SCARB2-227ENST00000640957 UNC119BA6NIH7 251 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 GTF2F2P13984 249 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 ST6GAL1P15907 406 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 SRMP19623 302 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 ITGB8P26012 769 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 SCRN3Q0VDG4 424 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 NKPD1Q17RQ9 610 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 SCGB2B2Q4G0G5 96 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 FIGNL1Q6PIW4 674 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 UBE3DQ7Z6J8 389 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 TCEAL8Q8IYN2 117 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 SUN3Q8TAQ9 357 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 RSRP1Q9BUV0 290 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 SLITRK2Q9H156 845 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 TLNRD1Q9H1K6 362 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 ANKRD10Q9NXR5 420 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 KIAA1671Q9BY89 1806 aa12.66□□□□□ -0.38
SCARB2-227ENST00000640957 COL4A4P53420 1690 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 PEX12O00623 359 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 ABCD4O14678 606 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 FABP1P07148 127 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 ACAA1P09110 424 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 ADCYAP1P18509 176 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 CTNNB1P35222 781 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 TAS2R38P59533 333 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 CLINT1Q14677 625 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 TCEAL5Q5H9L2 206 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 HSD17B13Q7Z5P4 300 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 PM20D2Q8IYS1 436 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 NUP43Q8NFH3 380 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 VN1R2Q8NFZ6 395 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 OR14A16Q8NHC5 309 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 AHCYL2Q96HN2 611 aaKnown RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 PTCHD1Q96NR3 888 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 ADGRL4Q9HBW9 690 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 TAS2R5Q9NYW4 299 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 SYT5O00445 386 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 NDUFS4O43181 175 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 LY86O95711 162 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 CERS1P27544 350 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 AQP2P41181 271 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 HOXA1P49639 335 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 EFNB2P52799 333 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 DLX5P56178 289 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 SMAD2Q15796 467 aaKnown RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 MAPK14Q16539 360 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 ZNF805Q5CZA5 627 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 FAM129CQ86XR2 697 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 C12orf45Q8N5I9 185 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 KCT2Q8NC54 265 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 OR4C6Q8NH72 309 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 MRPS30Q9NP92 439 aaKnown RBP12.65□□□□□ -0.38
SCARB2-227ENST00000640957 KLHL28Q9NXS3 571 aa12.65□□□□□ -0.38
SCARB2-227ENST00000640957 OR5V1Q9UGF6 321 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms