RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CCDC126Q96EE4 140 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 ZNF48Q96MX3 618 aaPredicted RBP11.13□□□□□ -0.63
SRRT-216ENST00000618262 REEP4Q9H6H4 257 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 CHODLQ9H9P2 273 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 C14orf119Q9NWQ9 140 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 TMEM181Q9P2C4 612 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 PCDHB11Q9Y5F2 797 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 KIF26BQ2KJY2 2108 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 RNF103-CHMP3A0A140T963 221 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 ZNF860A6NHJ4 632 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 MAGEB17A8MXT2 336 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 M0QZK8 103 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 LGALS8O00214 317 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 AZIN1O14977 448 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 SURF4O15260 269 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 ITGA3P26006 1051 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 HSD11B1P28845 292 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 SDHAP31040 664 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 FASLGP48023 281 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 RAB2AP61019 212 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 PRDX1Q06830 199 aaKnown RBP11.13□□□□□ -0.63
SRRT-216ENST00000618262 GK2Q14410 553 aaPredicted RBP11.13□□□□□ -0.63
SRRT-216ENST00000618262 PROX2Q3B8N5 592 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.13□□□□□ -0.63
SRRT-216ENST00000618262 HAGHLQ6PII5 290 aaPredicted RBP11.13□□□□□ -0.63
SRRT-216ENST00000618262 SPRED1Q7Z699 444 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 OR13C2Q8NGS9 318 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
SRRT-216ENST00000618262 TWIST2Q8WVJ9 160 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 ABHD17AQ96GS6 310 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 MED11Q9P086 117 aa11.13□□□□□ -0.63
SRRT-216ENST00000618262 MRPS18CQ9Y3D5 142 aaKnown RBP11.13□□□□□ -0.63
SRRT-216ENST00000618262 SCN2AQ99250 2005 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 AQP12BA6NM10 295 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 ZNF99A8MXY4 864 aaPredicted RBP11.12□□□□□ -0.63
SRRT-216ENST00000618262 ACOT8O14734 319 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 KLF4O43474 513 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 SNNO75324 88 aaPredicted RBP11.12□□□□□ -0.63
SRRT-216ENST00000618262 GP2P55259 537 aaKnown RBP11.12□□□□□ -0.63
SRRT-216ENST00000618262 VSX2P58304 361 aaPredicted RBP11.12□□□□□ -0.63
SRRT-216ENST00000618262 NCS1P62166 190 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 DEFA5Q01523 94 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 MAP4K2Q12851 820 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 PLA2G7Q13093 441 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 SNAPC1Q16533 368 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 RBM48Q5RL73 367 aaKnown RBP11.12□□□□□ -0.63
SRRT-216ENST00000618262 KDM4DQ6B0I6 523 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 SLCO4C1Q6ZQN7 724 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 ZFP82Q8N141 532 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 OR5T3Q8NGG3 340 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 OR8D4Q8NGM9 314 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 MS4A3Q96HJ5 214 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 LOXL4Q96JB6 756 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 RBP7Q96R05 134 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 DUSP23Q9BVJ7 150 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 ING4Q9UNL4 249 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 SPACA6W5XKT8 324 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 HEATR5BQ9P2D3 2071 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 PDCD5O14737 125 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 NDUFS4O43181 175 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 ITGAMP11215 1152 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 NDUFS1P28331 727 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 NBL1P41271 181 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 ARL4DP49703 201 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 DNAJB13P59910 316 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 BLOC1S1P78537 153 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 CEACAM7Q14002 265 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 P2RY14Q15391 338 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 GPR19Q15760 415 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 CSRP2Q16527 193 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 CDNFQ49AH0 187 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 OR2T11Q8NH01 316 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 ZNF300Q96RE9 604 aaPredicted RBP11.12□□□□□ -0.63
SRRT-216ENST00000618262 INTS14Q96SY0 518 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 SGPP1Q9BX95 441 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 ING2Q9H160 280 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 RNF121Q9H920 327 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 SLC5A6Q9Y289 635 aa11.12□□□□□ -0.63
SRRT-216ENST00000618262 TEX13DA0A0J9YY54 714 aaPredicted RBP11.11□□□□□ -0.63
SRRT-216ENST00000618262 DCDC2BA2VCK2 349 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 OR2W5A6NFC9 320 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 GFRA3O60609 400 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 SERPINA5P05154 406 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 SNRPB2P08579 225 aaKnown RBP11.11□□□□□ -0.63
SRRT-216ENST00000618262 BCL6P41182 706 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 RPS13P62277 151 aaKnown RBP11.11□□□□□ -0.63
SRRT-216ENST00000618262 CSNK1G2P78368 415 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 TUBB3Q13509 450 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 DGCR6Q14129 220 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 TATDN3Q17R31 274 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 F2RL3Q96RI0 385 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 SUCNR1Q9BXA5 334 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 RBCK1Q9BYM8 510 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 C5orf52A6NGY3 159 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 SLC22A31A6NKX4 558 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 TLX3O43711 291 aaPredicted RBP11.11□□□□□ -0.63
SRRT-216ENST00000618262 LRATO95237 230 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 CLEC3BP05452 202 aa11.11□□□□□ -0.63
SRRT-216ENST00000618262 C1GALT1C1LP0DN25 315 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms