RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RAB40BQ12829 278 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 BIKQ13323 160 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 DYNC1I2Q13409 638 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 SQSTM1Q13501 440 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 DCTN2Q13561 401 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 MELKQ14680 651 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TOMM20Q15388 145 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ODF4Q2M2E3 257 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TP53I3Q53FA7 332 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ALG10Q5BKT4 473 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 YOD1Q5VVQ6 348 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 NXNL2Q5VZ03 156 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 B3GNTL1Q67FW5 361 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 ARL9Q6T311 187 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 LINC00114Q6XXX2 140 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 HIST3H2AQ7L7L0 130 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TIPARPQ7Z3E1 657 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 NANOGNBQ7Z5D8 188 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 C7orf57Q8NEG2 295 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PROKR2Q8NFJ6 384 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TOR1AIP2Q8NFQ8 470 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 C9orf43Q8TAL5 461 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 SMPDL3BQ92485 455 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 HIST1H2ACQ93077 130 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ABTB1Q969K4 478 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 VMP1Q96GC9 406 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZNF426Q9BUY5 554 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 EDEM2Q9BV94 578 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ASPNQ9BXN1 380 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TGIF2Q9GZN2 237 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CDCP1Q9H5V8 836 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 POLE4Q9NR33 117 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CMC2Q9NRP2 79 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ERVK13-1Q9NX77 482 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TAS2R10Q9NYW0 307 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 MYOTQ9UBF9 498 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TMED7Q9Y3B3 224 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 MRPS18BQ9Y676 258 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 SIRT4Q9Y6E7 314 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 CACNA1GO43497 2377 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 IGLV3-12A0A075B6K2 115 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 A0A1W2PQL4 384 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 TMEM72A0PK05 275 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 VSTM2BA6NLU5 285 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 YKT6O15498 198 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 RNF13O43567 381 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 FADS1O60427 444 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PPM1BO75688 479 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZFAND5O76080 213 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 RPP14O95059 124 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 HLA-DQA2P01906 255 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SCG5P05408 212 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 FGF5P12034 268 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PIPP12273 146 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 HLA-DOBP13765 273 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CD59P13987 128 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PGCP20142 388 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CCKBRP32239 447 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SFTPDP35247 375 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 MAGEB1P43366 347 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PSMD7P51665 324 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 E2F1Q01094 437 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 IL11RAQ14626 422 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 INAQ16352 499 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZNF74Q16587 644 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 DCAF12Q5T6F0 453 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 FAM27D1Q5T7N8 215 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PEAR1Q5VY43 1037 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 MRPL14Q6P1L8 145 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 MRGPREQ86SM8 312 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SYT9Q86SS6 491 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ADGRG3Q86Y34 549 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CMIPQ8IY22 773 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ACBD7Q8N6N7 88 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZNF441Q8N8Z8 693 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 LSM14AQ8ND56 463 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 OR13C5Q8NGS8 318 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 OR5W2Q8NH69 310 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 HTRA1Q92743 480 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PMM1Q92871 262 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ORAI1Q96D31 301 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 GNRHR2Q96P88 292 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 ALG8Q9BVK2 526 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 SLIRPQ9GZT3 109 aaKnown RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 LAT2Q9GZY6 243 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 MMP25Q9NPA2 562 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 TIMMDC1Q9NPL8 285 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 QPCTLQ9NXS2 382 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 FBXL2Q9UKC9 423 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 CAB39Q9Y376 341 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 ZNF337Q9Y3M9 751 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 HS3ST3B1Q9Y662 390 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 BOD1L1Q8NFC6 3051 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 A0A087WV48 116 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 A0A1W2PNR3 127 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 A0A1W2PNU3 283 aaPredicted RBP3.12□□□□□ -1.91
LIG4-205ENST00000614526 A0A1W2PRG6 482 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 DOK2O60496 412 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 IFNGP01579 166 aa3.12□□□□□ -1.91
LIG4-205ENST00000614526 PNMTP11086 282 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms