RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TRNT1Q96Q11 434 aaKnown RBP9.22□□□□□ -0.93
CHMP2A-202ENST00000596708 PANX1Q96RD7 426 aa9.22□□□□□ -0.93
CHMP2A-202ENST00000596708 SF3B5Q9BWJ5 86 aaKnown RBP9.22□□□□□ -0.93
CHMP2A-202ENST00000596708 TAPBPLQ9BX59 468 aa9.22□□□□□ -0.93
CHMP2A-202ENST00000596708 SLC38A1Q9H2H9 487 aa9.22□□□□□ -0.93
CHMP2A-202ENST00000596708 MTHFD2LQ9H903 347 aaPredicted RBP9.22□□□□□ -0.93
CHMP2A-202ENST00000596708 RAP2CQ9Y3L5 183 aa9.22□□□□□ -0.93
CHMP2A-202ENST00000596708 MXRA5Q9NR99 2828 aa9.22□□□□□ -0.93
CHMP2A-202ENST00000596708 STAB1Q9NY15 2570 aa9.21□□□□□ -0.93
CHMP2A-202ENST00000596708 IGHV1-18A0A0C4DH31 117 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 SLC35F4A4IF30 521 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 CCDC154A6NI56 674 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 LIPT2A6NK58 231 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 VWC2LB2RUY7 222 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 ZNF587BE7ETH6 402 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 E9PBE3 544 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 FAAHO00519 579 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 TYROBPO43914 113 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 LGI1O95970 557 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 TGFAP01135 160 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 CRYAAP02489 173 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 GSNP06396 782 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 DBIP07108 87 aaKnown RBP9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 CHRM4P08173 479 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 GKN3PP0CG01 181 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 HNF1AP20823 631 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 THBS2P35442 1172 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 SERPINF1P36955 418 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 NR4A2P43354 598 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 SLC1A6P48664 564 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 COPZ1P61923 177 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 BNIP2Q12982 314 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 GSTA3Q16772 222 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 TBRG1Q3YBR2 411 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 FAM120AOSQ5T036 256 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 NIPAL3Q6P499 406 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 SPATA19Q7Z5L4 167 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 PEX5LQ8IYB4 626 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 ZNF440Q8IYI8 595 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 CADM2Q8N3J6 435 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 ANKS4BQ8N8V4 417 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 ZIC4Q8N9L1 334 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 PNPT1Q8TCS8 783 aaKnown RBP9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 MSI2Q96DH6 328 aaKnown RBP9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 CCDC115Q96NT0 180 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 SLC38A2Q96QD8 506 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 C19orf24Q9BVV8 132 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 NUF2Q9BZD4 464 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 ADAM19Q9H013 955 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 MYOZ1Q9NP98 299 aaPredicted RBP9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 OBP2BQ9NPH6 170 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 ADPRHL2Q9NX46 363 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 BTNL2Q9UIR0 455 aa9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.21□□□□□ -0.94
CHMP2A-202ENST00000596708 IGHV4-61A0A0C4DH41 118 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 LOC390937A0A1W2PQ73 354 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 AQP7P3A6NL99 342 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 B9A039 149 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 NR5A2O00482 541 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 PAX7P23759 505 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 SELENOPP49908 381 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 UFM1P61960 85 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 TUBA1BP68363 451 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 TUBA4AP68366 448 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 TXNL4AP83876 142 aaKnown RBP9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 LIPNQ5VXI9 398 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 TUBA1AQ71U36 451 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 VRK2Q86Y07 508 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 ZNF540Q8NDQ6 660 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 OR1K1Q8NGR3 316 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 OR52P1PQ8NH57 321 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 OR52E6Q96RD3 313 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 C20orf27Q9GZN8 174 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 RAB1BQ9H0U4 201 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 PIF1Q9H611 641 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 CA10Q9NS85 328 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 RLIMQ9NVW2 624 aa9.2□□□□□ -0.94
CHMP2A-202ENST00000596708 A0A096LPE4 126 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 A0A1W2PPZ6 126 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 A8MVM7 634 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 VSTM5A8MXK1 200 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 BIRC5O15392 142 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 SNUPNO95149 360 aaKnown RBP9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 VAMP5O95183 116 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 KRT75O95678 551 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 PGRP06401 933 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 C8BP07358 591 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 OR4A8P0C604 315 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 NCF2P19878 526 aaPredicted RBP9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 BGNP21810 368 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 RPS4Y1P22090 263 aaKnown RBP9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 CDKN2CP42773 168 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 VSNL1P62760 191 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 NAAAQ02083 359 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 LGALS3BPQ08380 585 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 SQLEQ14534 574 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 COX20Q5RI15 118 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 PRAMEF8Q5VWM4 474 aa9.19□□□□□ -0.94
CHMP2A-202ENST00000596708 PRAMEF7Q5VXH5 474 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms