RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TMEFF2Q9UIK5 374 aaPredicted RBP15.13■□□□□ 0.01
RETREG3-210ENST00000590541 PDLIM1O00151 329 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 HMGN4O00479 90 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 RFXANKO14593 260 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 TGDSO95455 350 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 IL2RGP31785 369 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 PGM1P36871 562 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 APOBEC1P41238 236 aaKnown RBP15.12■□□□□ 0.01
RETREG3-210ENST00000590541 NME5P56597 212 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 KCNJ10P78508 379 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 GNA13Q14344 377 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 ZSWIM7Q19AV6 140 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 TIGD2Q4W5G0 525 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 GPAT3Q53EU6 434 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 FRRS1Q6ZNA5 592 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 LRRC74BQ6ZQY2 392 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 OR52E4Q8NGH9 312 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 RAB8BQ92930 207 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 RMND5AQ9H871 391 aa15.12■□□□□ 0.01
RETREG3-210ENST00000590541 MTHFD2LQ9H903 347 aaPredicted RBP15.12■□□□□ 0.01
RETREG3-210ENST00000590541 SDR39U1Q9NRG7 319 aaPredicted RBP15.12■□□□□ 0.01
RETREG3-210ENST00000590541 SPIN1Q9Y657 262 aaPredicted RBP15.12■□□□□ 0.01
RETREG3-210ENST00000590541 HEATR1Q9H583 2144 aaKnown RBP15.11■□□□□ 0.01
RETREG3-210ENST00000590541 SULT2B1O00204 365 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 UBDO15205 165 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 CYP7B1O75881 506 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 UBTFL6P0CB48 400 aaPredicted RBP15.11■□□□□ 0.01
RETREG3-210ENST00000590541 ZCCHC18P0CG32 403 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 SESN3P58005 492 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 MTDHQ86UE4 582 aaKnown RBP15.11■□□□□ 0.01
RETREG3-210ENST00000590541 RNF130Q86XS8 419 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 SEMA6DQ8NFY4 1073 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 C7orf26Q96N11 449 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 VRK1Q99986 396 aaPredicted RBP15.11■□□□□ 0.01
RETREG3-210ENST00000590541 SLC17A5Q9NRA2 495 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 THUMPD1Q9NXG2 353 aaKnown RBP15.11■□□□□ 0.01
RETREG3-210ENST00000590541 CALML5Q9NZT1 146 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 MOKQ9UQ07 419 aa15.11■□□□□ 0.01
RETREG3-210ENST00000590541 COMPP49747 757 aaPredicted RBP15.1■□□□□ 0.01
RETREG3-210ENST00000590541 CLK1P49759 484 aaKnown RBP15.1■□□□□ 0.01
RETREG3-210ENST00000590541 MAP2K6P52564 334 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 SNRPD2P62316 118 aaKnown RBP15.1■□□□□ 0.01
RETREG3-210ENST00000590541 CSNK2A1P68400 391 aaPredicted RBP15.1■□□□□ 0.01
RETREG3-210ENST00000590541 FUT5Q11128 374 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 MAPK14Q16539 360 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 SLC9B1Q4ZJI4 515 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 C9orf135Q5VTT2 229 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 C17orf78Q8N4C9 275 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 ARFGAP2Q8N6H7 521 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 ZNF540Q8NDQ6 660 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 SGMS2Q8NHU3 365 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 ZFAND2BQ8WV99 257 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 ZMYND19Q96E35 227 aaPredicted RBP15.1■□□□□ 0.01
RETREG3-210ENST00000590541 ITCHQ96J02 903 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 AMDHD2Q9Y303 409 aa15.1■□□□□ 0.01
RETREG3-210ENST00000590541 CENPVL1A0A0U1RR11 272 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 AGAP5A6NIR3 686 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 LILRA1O75019 489 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 MRPL33O75394 65 aaKnown RBP15.09■□□□□ 0.01
RETREG3-210ENST00000590541 ANP32DO95626 131 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 STAMBPO95630 424 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 TACSTD2P09758 323 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 HTR3AP46098 478 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 MRPL19P49406 292 aaKnown RBP15.09■□□□□ 0.01
RETREG3-210ENST00000590541 MERTKQ12866 999 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 SYT14P1Q58G82 188 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 EPGNQ6UW88 154 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 GRINAQ7Z429 371 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 MIER2Q8N344 545 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 LINC01356Q8N9X3 169 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 ZNF563Q8TA94 476 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 LRRC8CQ8TDW0 803 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 ATP6V1G3Q96LB4 118 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 SLC38A1Q9H2H9 487 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 OCEL1Q9H607 264 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 DCTN4Q9UJW0 460 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 USH1CQ9Y6N9 552 aa15.09■□□□□ 0.01
RETREG3-210ENST00000590541 A0A0A6YYJ9 748 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 PRAMEF27A3QJZ7 478 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 FAAHO00519 579 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 GPR171O14626 319 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 DNPH1O43598 174 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 DBIP07108 87 aaKnown RBP15.08■□□□□ 0
RETREG3-210ENST00000590541 NR2F1P10589 423 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 UQCRBP14927 111 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 IL7RP16871 459 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 GIFP27352 417 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 CDKN2CP42773 168 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 POLR2JP52435 117 aaKnown RBP15.08■□□□□ 0
RETREG3-210ENST00000590541 SLC16A1P53985 500 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 STX1BP61266 288 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 SYPL1Q16563 259 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 SLC46A3Q7Z3Q1 461 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 PEX5LQ8IYB4 626 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 ZNF440Q8IYI8 595 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 C1orf162Q8NEQ5 155 aaPredicted RBP15.08■□□□□ 0
RETREG3-210ENST00000590541 ZG16BQ96DA0 208 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 ZHX1-C8orf76Q96EF9 292 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 OR52B2Q96RD2 323 aa15.08■□□□□ 0
RETREG3-210ENST00000590541 CCDC106Q9BWC9 280 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms