RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-215	ENST00000558868	ADGRG3	Q86Y34	549 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	CPO	Q8IVL8	374 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	OR4K17	Q8NGC6	315 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	PAQR8	Q8TEZ7	354 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	KIAA1143	Q96AT1	154 aa	Predicted RBP	12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	DDIT4L	Q96D03	193 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	NMD3	Q96D46	503 aa	Known RBP	12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	LGALS12	Q96DT0	336 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	FRMD6	Q96NE9	622 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	TSC22D3	Q99576	134 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	MND1	Q9BWT6	205 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	ANGPTL4	Q9BY76	406 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	ENKD1	Q9H0I2	346 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	HINT3	Q9NQE9	182 aa	Known RBP	12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	SERINC1	Q9NRX5	453 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	MED11	Q9P086	117 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	SPIN1	Q9Y657	262 aa	Predicted RBP	12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	OTOGL	Q3ZCN5	2332 aa		12.51	□□□□□ -0.41
TPM1-215	ENST00000558868	CEP250	Q9BV73	2442 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	LOC101059948	A0A1B0GTJ6	334 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	TMEM72	A0PK05	275 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ANKRD33B	A6NCL7	494 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	SLC22A31	A6NKX4	558 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	NPIPB7	O75200	414 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	SNX4	O95219	450 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	BGLAP	P02818	100 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ADORA3	P0DMS8	318 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ACVR2A	P27037	513 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	EIF1	P41567	113 aa	Known RBP	12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	LGALS3BP	Q08380	585 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ITGAD	Q13349	1161 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	TIGD6	Q17RP2	521 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	12.5	□□□□□ -0.41	9e-6	■■■■□ 24.9
TPM1-215	ENST00000558868	ALG10	Q5BKT4	473 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	EMC4	Q5J8M3	183 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	C1orf140	Q5VVS0	124 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	OR5M10	Q6IEU7	315 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	PLBD1	Q6P4A8	553 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	POMZP3	Q6PJE2	187 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	IGF2-AS	Q6U949	168 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ANKRD13B	Q86YJ7	626 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ERI1	Q8IV48	349 aa	Known RBP	12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	IL22RA1	Q8N6P7	574 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	LRRC17	Q8N6Y2	441 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	FADS6	Q8N9I5	356 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	FAM98A	Q8NCA5	519 aa	Known RBP	12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	PROKR2	Q8NFJ6	384 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	OR2M3	Q8NG83	312 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	OR52I1	Q8NGK6	324 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	TAAR8	Q969N4	342 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	OTULIN	Q96BN8	352 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ZNF524	Q96C55	264 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	C12orf43	Q96C57	262 aa	Known RBP	12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	KTI12	Q96EK9	354 aa	Predicted RBP	12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	DTNBP1	Q96EV8	351 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	COG8	Q96MW5	612 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	KLHDC3	Q9BQ90	382 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	TAPBPL	Q9BX59	468 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	ASPN	Q9BXN1	380 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	CXorf56	Q9H5V9	222 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	NRIP3	Q9NQ35	241 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	CHRNA9	Q9UGM1	479 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	TEKT2	Q9UIF3	430 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	EXOG	Q9Y2C4	368 aa	Known RBP	12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	IER3IP1	Q9Y5U9	82 aa		12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	GCN1	Q92616	2671 aa	Known RBP	12.5	□□□□□ -0.41
TPM1-215	ENST00000558868	FLNB	O75369	2602 aa	Known RBP	12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	SDK2	Q58EX2	2172 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	C2orf72	A6NCS6	295 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	C17orf51	A8MQB3	221 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	MCIDAS	D6RGH6	385 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	LRRN3	E7EW58	273 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	BLOC1S5-TXNDC5	H3BN57	136 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	CDK2AP1	O14519	115 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	MYL12B	O14950	172 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	SLC2A10	O95528	541 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	LCK	P06239	509 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	CD14	P08571	375 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	TSPAN19	P0C672	248 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	ADH6	P28332	368 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	UQCRC1	P31930	480 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	ATP6V1E1	P36543	226 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	RPS5	P46782	204 aa	Known RBP	12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	POU4F2	Q12837	409 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	LCN1P1	Q5VSP4	162 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	BICRAL	Q6AI39	1079 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	FCRLB	Q6BAA4	426 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	GPR139	Q6DWJ6	353 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	NIPAL3	Q6P499	406 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	PLCZ1	Q86YW0	608 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	PSD4	Q8NDX1	1056 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	NKD1	Q969G9	470 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	ZBTB8A	Q96BR9	441 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	YIPF6	Q96EC8	236 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	FER1L6-AS2	Q96M78	137 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	MOGAT1	Q96PD6	335 aa		12.49	□□□□□ -0.41
TPM1-215	ENST00000558868	FUNDC2	Q9BWH2	189 aa		12.49	□□□□□ -0.41

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