RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 EEF1E1O43324 174 aaKnown RBP4.86□□□□□ -1.63
USP28-213ENST00000544967 LANCL1O43813 399 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 TBX19O60806 448 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 RAMP2O60895 175 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 FBXO24O75426 580 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 PDYNP01213 254 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 EIF4EP06730 217 aaKnown RBP4.86□□□□□ -1.63
USP28-213ENST00000544967 CTSLP07711 333 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 TIMP2P16035 220 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 C5AR1P21730 350 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 HTR2AP28223 471 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 SLC6A12P48065 614 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 EEF1A1P68104 462 aaKnown RBP4.86□□□□□ -1.63
USP28-213ENST00000544967 HMGCS1Q01581 520 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 PDE7AQ13946 482 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 NKAPLQ5M9Q1 402 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 EEF1A1P5Q5VTE0 462 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 CDC73Q6P1J9 531 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 C1orf94Q6P1W5 598 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 SFXN4Q6P4A7 337 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 IL34Q6ZMJ4 242 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 ZNF621Q6ZSS3 439 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 ABHD13Q7L211 337 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 TMPRSS9Q7Z410 1059 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 WDR53Q7Z5U6 358 aaPredicted RBP4.86□□□□□ -1.63
USP28-213ENST00000544967 OR11G2Q8NGC1 345 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 OR13C4Q8NGS5 318 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 SPXQ9BT56 116 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 TM6SF2Q9BZW4 377 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 ZCCHC2Q9C0B9 1178 aaKnown RBP4.86□□□□□ -1.63
USP28-213ENST00000544967 LMAN1LQ9HAT1 526 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 DNAJC27Q9NZQ0 273 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 PCDHGA5Q9Y5G8 931 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 SNX10Q9Y5X0 201 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 ARL5AQ9Y689 179 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 POMT1Q9Y6A1 747 aa4.86□□□□□ -1.63
USP28-213ENST00000544967 TRBV5-4A0A0C4DH59 114 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 A0A0D9SEW6 157 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 C9orf170A2RU37 121 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 GABARAPH6UMI1 98 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 GPRIN2O60269 458 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 ZNF217O75362 1048 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 CBR3O75828 277 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 CD8AP01732 235 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 RHOCP08134 193 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 ANXA5P08758 320 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 COX7A2P14406 83 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 ACADLP28330 430 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 MAS1LP35410 378 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 DRD3P35462 400 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 MTNR1AP48039 350 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 UBE2IP63279 158 aaKnown RBP4.85□□□□□ -1.63
USP28-213ENST00000544967 CDK6Q00534 326 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 SSBP1Q04837 148 aaKnown RBP4.85□□□□□ -1.63
USP28-213ENST00000544967 PMS2P11Q13670 270 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 IHHQ14623 411 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 TRAM2Q15035 370 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 ZNF648Q5T619 568 aaPredicted RBP4.85□□□□□ -1.63
USP28-213ENST00000544967 PIP5KL1Q5T9C9 394 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 AGBL4Q5VU57 503 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 VASNQ6EMK4 673 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 ZNF425Q6IV72 752 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 RPL13AP3Q6NVV1 102 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 ZNF813Q6ZN06 617 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 DEF8Q6ZN54 512 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 FAM83HQ6ZRV2 1179 aaPredicted RBP4.85□□□□□ -1.63
USP28-213ENST00000544967 Q6ZS52 159 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 LDLRAD3Q86YD5 345 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 SYT12Q8IV01 421 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 MISPQ8IVT2 679 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 KCNRGQ8N5I3 272 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 BPIFCQ8NFQ6 507 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 OR14A16Q8NHC5 309 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 COQ8AQ8NI60 647 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 THEM6Q8WUY1 208 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 ASZ1Q8WWH4 475 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 RNFT2Q96EX2 444 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 MRGPRX1Q96LB2 322 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 ZNF285Q96NJ3 590 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 TEX12Q9BXU0 123 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 POLR2J3Q9H1A7 115 aaKnown RBP4.85□□□□□ -1.63
USP28-213ENST00000544967 TMPRSS5Q9H3S3 457 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 SGK2Q9HBY8 427 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 C2orf42Q9NWW7 574 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 FOXD3Q9UJU5 478 aaPredicted RBP4.85□□□□□ -1.63
USP28-213ENST00000544967 CLCA2Q9UQC9 943 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 KCTD3Q9Y597 815 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 TRIOO75962 3097 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 LOC105369274A0A096LPK9 316 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 MEX3AA1L020 520 aaKnown RBP4.85□□□□□ -1.63
USP28-213ENST00000544967 UBE2QL1A1L167 161 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 PRR19A6NJB7 356 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 DISC1C4P0D8 188 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 RNF13O43567 381 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 VEGFDO43915 354 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 NDUFB6O95139 128 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 H1F0P07305 194 aaKnown RBP4.85□□□□□ -1.63
USP28-213ENST00000544967 C8GP07360 202 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 JMJD7P0C870 316 aa4.85□□□□□ -1.63
USP28-213ENST00000544967 MPC1LP0DKB6 136 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms