RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 CNR1P21554 472 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 RORAP35398 523 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 MRPS10P82664 201 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 TPGS2Q68CL5 300 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 TMEM64Q6YI46 380 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 ZNF793Q6ZN11 406 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 GLB1L2Q8IW92 636 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 OR51S1Q8NGJ8 323 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 OR4C16Q8NGL9 310 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 OR6K3Q8NGY3 331 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 SFXN5Q8TD22 340 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 XKR8Q9H6D3 395 aa11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 EXOSC3Q9NQT5 275 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 ZNF106Q9H2Y7 1883 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-209ENST00000540469 OR2AT4A6NND4 320 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 MPTX1A8MV57 137 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 F5H0A9 414 aaPredicted RBP11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 LEFTY2O00292 366 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 ADAMTS4O75173 837 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 ACADLP28330 430 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 ASTLQ6HA08 431 aaPredicted RBP11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 RAB42Q8N4Z0 105 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 EIF4E3Q8N5X7 224 aaKnown RBP11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 MOAP1Q96BY2 351 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 MRPL48Q96GC5 212 aaKnown RBP11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 C10orf90Q96M02 699 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 GPR174Q9BXC1 333 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 ACTRT3Q9BYD9 372 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 PLEKHA1Q9HB21 404 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 TREM1Q9NP99 234 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 CLDND1Q9NY35 253 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 FOXJ3Q9UPW0 622 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 INSL5Q9Y5Q6 135 aa11.83□□□□□ -0.51
SFSWAP-209ENST00000540469 A0A1W2PR48 441 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 DUXAA6NLW8 204 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 AIFM1O95831 613 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 MAS1P04201 325 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 RPN2P04844 631 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 RAB40ALP0C0E4 278 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 CTSAP10619 480 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 CERS1P27544 350 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 CALCRP30988 508 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 FLT3LGP49771 235 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 FKBP1BP68106 108 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 MLC1Q15049 377 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 ODF4Q2M2E3 257 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 EIPR1Q53HC9 387 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF805Q5CZA5 627 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 RPL22L1Q6P5R6 122 aaKnown RBP11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF836Q6ZNA1 936 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 UBE3DQ7Z6J8 389 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 AMZ2Q86W34 360 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 SLC35F2Q8IXU6 374 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 RAB40AQ8WXH6 277 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 DVL3Q92997 716 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 NUS1Q96E22 293 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 HSPA12BQ96MM6 686 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 CASP8AP2Q9UKL3 1982 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 CEP290O15078 2479 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 KLF4O43474 513 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 SULT1B1O43704 296 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 FOSL1P15407 271 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 MGMTP16455 207 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 AGTR1P30556 359 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 S100A12P80511 92 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 POU4F2Q12837 409 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF234Q14588 700 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 PON3Q15166 354 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 OR1Q1Q15612 314 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 OLFML2AQ68BL7 652 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 RPL13AP3Q6NVV1 102 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 SLC16A13Q7RTY0 426 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 ACOT4Q8N9L9 421 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 VN1R2Q8NFZ6 395 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 WNT2BQ93097 391 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF75AQ96N20 296 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 CMSS1Q9BQ75 279 aaKnown RBP11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 ZNF559Q9BR84 538 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 CRB3Q9BUF7 120 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 SLC19A3Q9BZV2 496 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 MTHFD2LQ9H903 347 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 ADAP2Q9NPF8 381 aa11.83□□□□□ -0.52
SFSWAP-209ENST00000540469 PRKCZQ05513 592 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 SEZ6L2Q6UXD5 910 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 NUDT18Q6ZVK8 323 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 HTR3DQ70Z44 454 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 MTSS1LQ765P7 747 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 DPPA4Q7L190 304 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 PUSL1Q8N0Z8 303 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 C15orf40Q8WUR7 153 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 SLC35A4Q96G79 324 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 ESRP2Q9H6T0 727 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 FKRPQ9H9S5 495 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 OR5V1Q9UGF6 321 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 HOXA2O43364 376 aa11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 NARSO43776 548 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 TMIGD3P0DMS9 266 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 AK4P27144 223 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-209ENST00000540469 FXYD6P3P58550 94 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms