RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 RPS4XP62701 263 aaKnown RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 TUBA1BP68363 451 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 BASP1P80723 227 aaKnown RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 RAD51Q06609 339 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 CNTN1Q12860 1018 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 ATXN7L3Q14CW9 347 aaPredicted RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 MAPRE2Q15555 327 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 MRPL23Q16540 153 aaKnown RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 DUOXA1Q1HG43 343 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 AGAP7PQ5VUJ5 663 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 ZNF470Q6ECI4 717 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 BHLHB9Q6PI77 547 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 PARM1Q6UWI2 310 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 TUBA1AQ71U36 451 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 RBM23Q86U06 439 aaKnown RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 ITIH5Q86UX2 942 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 LRRC6Q86X45 466 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 RNF130Q86XS8 419 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 NUDCD3Q8IVD9 361 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 CCDC50Q8IVM0 306 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 SLC39A11Q8N1S5 342 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 ZNF781Q8N8C0 355 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 SMRP1Q8NCR6 262 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 CDC26Q8NHZ8 85 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 ERMNQ8TAM6 284 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 CCDC124Q96CT7 223 aaKnown RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 PCED1BQ96HM7 432 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 AGAP4Q96P64 663 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 TRAF4Q9BUZ4 470 aaPredicted RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 ANKRD19PQ9H560 264 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 TMEM165Q9HC07 324 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 S100A14Q9HCY8 104 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 OLFML3Q9NRN5 406 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 RBAKQ9NYW8 714 aaPredicted RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 KLRF1Q9NZS2 232 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 CLN8Q9UBY8 286 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 ANAPC7Q9UJX3 599 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 FBXL4Q9UKA2 621 aa5.24□□□□□ -1.57
MRE11-209ENST00000540013 EXOGQ9Y2C4 368 aaKnown RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 PDCD11Q14690 1871 aaKnown RBP5.24□□□□□ -1.57
MRE11-209ENST00000540013 CNTNAP2Q9UHC6 1331 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 VWA8A3KMH1 1905 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 PIEZO1Q92508 2521 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 KCNE1BA0A087WTH5 132 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 A0A087WWV3 80 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 TRBV5-5A0A0J9YX44 114 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 C1orf232A0A0U1RR37 186 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CCT8L1PA6NM43 557 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 SCN2BO60939 215 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 FCER2P06734 321 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 DCNP07585 359 aaKnown RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 UBCP0CG48 685 aaKnown RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 HOXB8P17481 243 aaPredicted RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 GM2AP17900 193 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CD82P27701 267 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CCKBRP32239 447 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 ARL2P36404 184 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 MMP12P39900 470 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 RPL13AP40429 203 aaKnown RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 NPBWR2P48146 333 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 RAB10P61026 200 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 SEC61A1P61619 476 aaKnown RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 PIGHQ14442 188 aaPredicted RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 DMC1Q14565 340 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CHI3L2Q15782 390 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 TMEM35AQ53FP2 167 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 DDI2Q5TDH0 399 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 ULK3Q6PHR2 472 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 ASCL4Q6XD76 172 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 SLC16A12Q6ZSM3 486 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 RFPL4BQ6ZWI9 263 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 UTS2BQ765I0 119 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 ARCQ7LC44 396 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CYP4Z1Q86W10 505 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CATSPER3Q86XQ3 398 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 PLCZ1Q86YW0 608 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 ERI1Q8IV48 349 aaKnown RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 NELFCDQ8IXH7 590 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CENPSQ8N2Z9 138 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 C8orf31Q8N9H6 132 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 FBXO36Q8NEA4 188 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 OR52N5Q8NH56 324 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 UBA3Q8TBC4 463 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 GPR148Q8TDV2 347 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 PHLDA1Q8WV24 401 aaPredicted RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 FCAMRQ8WWV6 532 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 PNPLA2Q96AD5 504 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 SLC47A1Q96FL8 570 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CHMP6Q96FZ7 201 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 CPB2Q96IY4 423 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 SLC25A51Q9H1U9 297 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 SLC17A5Q9NRA2 495 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 MS4A12Q9NXJ0 267 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 ZNF229Q9UJW7 825 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 EIF3LQ9Y262 564 aaKnown RBP5.23□□□□□ -1.57
MRE11-209ENST00000540013 AMDHD2Q9Y303 409 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 WIPI2Q9Y4P8 454 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 PLXNA3P51805 1871 aa5.23□□□□□ -1.57
MRE11-209ENST00000540013 DENND4AQ7Z401 1863 aa5.22□□□□□ -1.57
MRE11-209ENST00000540013 IQANK1A0A1B0GTG1 560 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms