RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SLC35G4P0C7Q5 338 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 LAMP2P13473 410 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 ART1P52961 327 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 H2BFSP57053 126 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 CBFBQ13951 182 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 PABPC1L2AQ5JQF8 200 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 FAM111BQ6SJ93 734 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 ATRAIDQ6UW56 229 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 ADAMTSL4Q6UY14 1074 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 ERN2Q76MJ5 926 aaKnown RBP16.19■□□□□ 0.18
RAB40C-205ENST00000539661 SLC35F2Q8IXU6 374 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 OR2AK2Q8NG84 335 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 PXYLP1Q8TE99 480 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 ATOH1Q92858 354 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-205ENST00000539661 MIB2Q96AX9 1013 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 OR1F2PQ96R84 312 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 SDF2Q99470 211 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 RSPH9Q9H1X1 276 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-205ENST00000539661 HPF1Q9NWY4 346 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 CYB5R1Q9UHQ9 305 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 PYCARD-AS1I3L0S3 204 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 TGM5O43548 720 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 PRAMEF2O60811 474 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 GYPBP06028 91 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 FCER2P06734 321 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 VSIG10L2P0DP72 767 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 MPGP29372 298 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 CLDN2P57739 230 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 ZNF619Q8N2I2 560 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 OR7G2Q8NG99 324 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 OR5M1Q8NGP8 315 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 HMGB4Q8WW32 186 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 ARRDC3Q96B67 414 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 CFHR5Q9BXR6 569 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 ZNF350Q9GZX5 532 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 OR5V1Q9UGF6 321 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 GNG8Q9UK08 70 aa16.19■□□□□ 0.18
RAB40C-205ENST00000539661 TRAV27A0A087WT01 109 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 CHURC1-FNTBB4DL54 471 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 UBBP0CG47 229 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 UBCP0CG48 685 aaKnown RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 ACRP10323 421 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 ZNF35P13682 527 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 NID1P14543 1247 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 METAP1P53582 386 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 ST8SIA6P61647 398 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 RPS27AP62979 156 aaKnown RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 UBA52P62987 128 aaKnown RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 TMEM52BQ4KMG9 183 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 C17orf107Q6ZR85 190 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 SERPINA12Q8IW75 414 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 TMIEQ8NEW7 156 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 PDCD1LG2Q9BQ51 273 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 POT1Q9NUX5 634 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 FBXL21Q9UKT6 434 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 KCNK7Q9Y2U2 307 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 ZNF281Q9Y2X9 895 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 RNGTTO60942 597 aaKnown RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 CDC123O75794 336 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 CDK2P24941 298 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 RAB28P51157 221 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 TAS2R20P59543 309 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 GPR68Q15743 365 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 CSRP2Q16527 193 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 NDUFAF6Q330K2 333 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 MRPL2Q5T653 305 aaKnown RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 FAAP20Q6NZ36 180 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 ZNF613Q6PF04 617 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 SAMD14Q8IZD0 417 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 LRRC25Q8N386 305 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 CAMKVQ8NCB2 501 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 OR52B4Q8NGK2 314 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 OR51A7Q8NH64 312 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 OR14A16Q8NHC5 309 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 ZMYND19Q96E35 227 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 SLC6A17Q9H1V8 727 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 MRPS30Q9NP92 439 aaKnown RBP16.18■□□□□ 0.18
RAB40C-205ENST00000539661 TAS2R8Q9NYW2 309 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 CEP290O15078 2479 aa16.18■□□□□ 0.18
RAB40C-205ENST00000539661 CENPVL1A0A0U1RR11 272 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 PCP4L1A6NKN8 68 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 CTNSO60931 367 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 STATHP02808 62 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 GKN3PP0CG01 181 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 HOXB1P14653 301 aaPredicted RBP16.17■□□□□ 0.18
RAB40C-205ENST00000539661 HCCSP53701 268 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 DUSP5Q16690 384 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 TMEM17Q86X19 198 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 OR2L13Q8N349 312 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 ZNF433Q8N7K0 673 aaPredicted RBP16.17■□□□□ 0.18
RAB40C-205ENST00000539661 LRRC46Q96FV0 321 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 MACROD1Q9BQ69 325 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 RAB11FIP5Q9BXF6 653 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 TTTY10Q9BZA0 68 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 MEPEQ9NQ76 525 aaPredicted RBP16.17■□□□□ 0.18
RAB40C-205ENST00000539661 NCDNQ9UBB6 729 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 PURGQ9UJV8 347 aaKnown RBP16.17■□□□□ 0.18
RAB40C-205ENST00000539661 PLCL2Q9UPR0 1127 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 SIGLEC6O43699 453 aa16.17■□□□□ 0.18
RAB40C-205ENST00000539661 KDM4BO94953 1096 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms