RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RPS5P46782 204 aaKnown RBP20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 OR1E2P47887 323 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 P2RY4P51582 365 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 MNAT1P51948 309 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 C5orf46Q6UWT4 87 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 C16orf89Q6UX73 402 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 TFAP2EQ6VUC0 442 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 LINC00114Q6XXX2 140 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 WDR88Q6ZMY6 472 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 CBLL1Q75N03 491 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 TMEM99Q8N816 258 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 TAAR8Q969N4 342 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 CDRT15Q96T59 188 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 ADPRHL2Q9NX46 363 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 NDE1Q9NXR1 346 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 ELOVL5Q9NYP7 299 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 CD300AQ9UGN4 299 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 EGFL7Q9UHF1 273 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 TRAV36DV7A0A075B6V5 113 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 AQP7P3A6NL99 342 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 HSD17B1P14061 328 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 CD79BP40259 229 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 KIR2DL3P43628 341 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 MXRA7P84157 204 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 SLC17A1Q14916 467 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 FXNQ16595 210 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 SAMD4BQ5PRF9 694 aaKnown RBP20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 OTUD3Q5T2D3 398 aaPredicted RBP20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 VTCN1Q7Z7D3 282 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 DEFB107AQ8IZN7 70 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 FAM156AQ8NDB6 213 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 LZICQ8WZA0 190 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 TMEM43Q9BTV4 400 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 SLC24A3Q9HC58 644 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 CRIM1Q9NZV1 1036 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 KCNN3Q9UGI6 736 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 NOTCH2Q04721 2471 aa20.18■□□□□ 0.82
SFSWAP-204ENST00000535399 B2RBV5 119 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 SERPINA1P01009 418 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 POU2F1P14859 743 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 CALB2P22676 271 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 EDNRAP25101 427 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 EXOC3L2Q2M3D2 409 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 DEF8Q6ZN54 512 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 RBM15BQ8NDT2 890 aaKnown RBP20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 FAM162AQ96A26 154 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 SLC25A36Q96CQ1 311 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 EMC3Q9P0I2 261 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 SLC7A7Q9UM01 511 aa20.17■□□□□ 0.82
SFSWAP-204ENST00000535399 GPR171O14626 319 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 OR2T1O43869 369 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 ZNF682O95780 498 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 PTNP21246 168 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 CCKARP32238 428 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 NTF4P34130 210 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 OR3A2P47893 321 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 FAM69AQ5T7M9 428 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 GLYATQ6IB77 296 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 TRPM8Q7Z2W7 1104 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 GDF7Q7Z4P5 450 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 GALNT5Q7Z7M9 940 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 STK32CQ86UX6 486 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 OR6S1Q8NH40 331 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 LINC01560Q8TB33 94 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 C14orf79Q96F83 325 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 SLC41A3Q96GZ6 507 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 EPYCQ99645 322 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 PRSS27Q9BQR3 290 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 ZNF426Q9BUY5 554 aa20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 POLR2J2Q9GZM3 115 aaKnown RBP20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 POLR2J3Q9H1A7 115 aaKnown RBP20.16■□□□□ 0.82
SFSWAP-204ENST00000535399 TUBAL3A6NHL2 446 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 OR5F1O95221 314 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 TCN1P20061 433 aaPredicted RBP20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 UGT2B10P36537 528 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 LTBQ06643 244 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 PIN1Q13526 163 aaPredicted RBP20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 BEND4Q6ZU67 534 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 GABRG1Q8N1C3 465 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 FAM222BQ8WU58 562 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 MPP4Q96JB8 637 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 SF3B5Q9BWJ5 86 aaKnown RBP20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 SEC14L4Q9UDX3 406 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 RIMS3Q9UJD0 308 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 NOSIPQ9Y314 301 aaKnown RBP20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 FLVCR1Q9Y5Y0 555 aa20.15■□□□□ 0.82
SFSWAP-204ENST00000535399 C16orf97H3BN30 126 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 BGLAPP02818 100 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 TAS2R41P59536 307 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 SPATS1Q496A3 300 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 IFI44LQ53G44 452 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 STAC2Q6ZMT1 411 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 RINLQ6ZS11 566 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 ZIC4Q8N9L1 334 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 OR9K2Q8NGE7 335 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 GEMIN6Q8WXD5 167 aaKnown RBP20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 HSH2DQ96JZ2 352 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 AMBRA1Q9C0C7 1298 aa20.14■□□□□ 0.81
SFSWAP-204ENST00000535399 GORASP2Q9H8Y8 452 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms