RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	CCDC22	O60826	627 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NPIPB7	O75200	414 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NPPA	P01160	153 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	IGHV1-2	P23083	117 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GZMM	P51124	257 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	EGR4	Q05215	589 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SLC17A1	Q14916	467 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	STK11	Q15831	433 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	VMAC	Q2NL98	169 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	INTS11	Q5TA45	600 aa	Known RBP	12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FBXW9	Q5XUX1	488 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ULK3	Q6PHR2	472 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PAMR1	Q6UXH9	720 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PATL1	Q86TB9	770 aa	Known RBP	12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	RANBP3L	Q86VV4	465 aa	Predicted RBP	12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OR8J3	Q8NGG0	315 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	VANGL1	Q8TAA9	524 aa	Predicted RBP	12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	DNAJA4	Q8WW22	397 aa	Predicted RBP	12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	NINJ1	Q92982	152 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TAMM41	Q96BW9	452 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	RCN3	Q96D15	328 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	KTI12	Q96EK9	354 aa	Predicted RBP	12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	HS3ST6	Q96QI5	342 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OR10A4	Q9H209	315 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TES	Q9UGI8	421 aa	Known RBP	12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	USP22	Q9UPT9	525 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SLC9A8	Q9Y2E8	581 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FLVCR1	Q9Y5Y0	555 aa		12.51	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OTOG	Q6ZRI0	2925 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	AQP7P3	A6NL99	342 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	AIM2	O14862	343 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SLC22A2	O15244	555 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	KLF4	O43474	513 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	LGI1	O95970	557 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	RAF1	P04049	648 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PNMT	P11086	282 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PTN	P21246	168 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CBL	P22681	906 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GTF2E2	P29084	291 aa	Known RBP	12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GYS2	P54840	703 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FAP	Q12884	760 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TAB1	Q15750	504 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	BEX5	Q5H9J7	111 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SPATA21	Q7Z572	469 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GPR32P1	Q8NGA4	272 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OR9K2	Q8NGE7	335 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	MFSD8	Q8NHS3	518 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	RP9	Q8TA86	221 aa	Known RBP	12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TAAR8	Q969N4	342 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SLC47A1	Q96FL8	570 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PLPPR2	Q96GM1	343 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZNF385A	Q96PM9	386 aa	Known RBP	12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	MCHR1	Q99705	422 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ARHGDIG	Q99819	225 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PTDSS2	Q9BVG9	487 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	UBTD1	Q9HAC8	227 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	C12orf10	Q9HB07	376 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PARPBP	Q9NWS1	579 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	UPB1	Q9UBR1	384 aa		12.5	□□□□□ -0.41
CCHCR1-222	ENST00000507459	AKAP9	Q99996	3911 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459		A0A0B4J2E0	115 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459		A0A1B0GX12	115 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CIB4	A0PJX0	185 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CCT8L1P	A6NM43	557 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	RAD51D	O75771	328 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CNOT4	O95628	575 aa	Known RBP	12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	C8B	P07358	591 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	COX4I1	P13073	169 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	GGT1	P19440	569 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CD247	P20963	164 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	LOX	P28300	417 aa	Predicted RBP	12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CDH12	P55289	794 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	TESK1	Q15569	626 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	C9orf135	Q5VTT2	229 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FAM91A1	Q658Y4	838 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	C6orf89	Q6UWU4	347 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	AAED1	Q7RTV5	226 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CALHM3	Q86XJ0	350 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	RBM45	Q8IUH3	476 aa	Known RBP	12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	KDM8	Q8N371	416 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZIC4	Q8N9L1	334 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	OR6T1	Q8NGN1	323 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	HSD17B8	Q92506	261 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SLC38A4	Q969I6	547 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ZNF583	Q96ND8	569 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SF3B5	Q9BWJ5	86 aa	Known RBP	12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ASB6	Q9NWX5	421 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	SEC14L4	Q9UDX3	406 aa		12.49	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PRRC2A	P48634	2157 aa	Known RBP	12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	IGKV1D-42	A0A075B6H8	117 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459		A0A087WUJ7	227 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	CPSF4L	A6NMK7	179 aa	Known RBP	12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FTCDNL1	E5RQL4	147 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	ATE1	O95260	518 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	PLAU	P00749	431 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	COX5A	P20674	150 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	P2RY4	P51582	365 aa		12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	FOXG1	P55316	489 aa	Predicted RBP	12.48	□□□□□ -0.41
CCHCR1-222	ENST00000507459	IL1RL1	Q01638	556 aa		12.48	□□□□□ -0.41

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